Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01648 and BPUM_0909

See DNA alignment / Visit BSNT_01648 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence pep-align/BSNT_01648___ccrB.1.24716.seq
#    -bsequence pep-align/BPUM_0909___ccrB2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01648___ccrB-BPUM_0909___ccrB2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01648___ccrB-BPUM_0909___ccrB2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01648___ccrB
# 2: BPUM_0909___ccrB2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:      66/132 (50.0%)
# Similarity:    89/132 (67.4%)
# Gaps:           8/132 ( 6.1%)
# Score: 317.5
# 
#
#=======================================

BSNT_01648___      1 MKIYSAVFIGGALGACLRYGLNLWIHTGQFPAATWLENAAGSLLLGILTG     50
                     ||.|.||||||.:|...||.|:..:.:..||.||.:||.|||||||..||
BPUM_0909___c      1 MKAYLAVFIGGLIGTLCRYELSQSVVSQTFPYATLIENVAGSLLLGFSTG     50

BSNT_01648___     51 FFMIGAKRPLLSAFLGTGFCGGFTTMSTFSKETVMLLQ-GQPSLALLYVA     99
                     :||...::..|:|.:||||||||||||||||||::||| ||.:|::.|:.
BPUM_0909___c     51 YFMFQKRKKYLAALIGTGFCGGFTTMSTFSKETILLLQTGQFTLSVTYIL    100

BSNT_01648___    100 ASLISGIIFALIGVFAGRRIAGIQQRKGLQER    131
                     .|:|:|:..||.|:...:|:  .|:.|     
BPUM_0909___c    101 LSVIAGLAAALCGLMLAQRL--FQRNK-----    125


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