Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00394 and BPUM_0907

See DNA alignment / Visit BSNT_00394 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:17
# Commandline: needle
#    -asequence pep-align/BSNT_00394.1.24716.seq
#    -bsequence pep-align/BPUM_0907.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00394-BPUM_0907.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00394-BPUM_0907.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00394
# 2: BPUM_0907
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:      50/143 (35.0%)
# Similarity:    86/143 (60.1%)
# Gaps:          13/143 ( 9.1%)
# Score: 243.0
# 
#
#=======================================

BSNT_00394         1 MYTLQEISKPKRKKLVKNIEKHLKNYNNYKVAILNLSKQLEFIATNDNME     50
                     |...:..|..::|..:|.||.||||:.||:.||||:.:|||..:::....
BPUM_0907          1 MLWYETASITEKKTSMKRIEFHLKNFKNYQAAILNIERQLEKRSSHHLEH     50

BSNT_00394        51 IFKESIDDDCEFQESVDKLAGELQHIKLLKDSIDISLSELTELEYRFVQY    100
                     :.::             ||..:....:|:...|:.:|.||.|:|.:.:.|
BPUM_0907         51 MTRK-------------KLEEQKNQYELIVACIETALKELDEIEKQLIDY     87

BSNT_00394       101 RYFKNWTIEKSALEIGYSDKALFVIRNQVMDKLLISLGSVVYM    143
                     :||::|.:.|.|:|||||:|.||:::.|:||:|||||.::..:
BPUM_0907         88 KYFRDWRMAKCAMEIGYSEKTLFLMKRQLMDQLLISLAAITNV    130


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