Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01642 and BPUM_0905
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:08
# Commandline: needle
# -asequence pep-align/BSNT_01642.1.24716.seq
# -bsequence pep-align/BPUM_0905___cueR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01642-BPUM_0905___cueR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01642-BPUM_0905___cueR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01642
# 2: BPUM_0905___cueR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 91/182 (50.0%)
# Similarity: 110/182 (60.4%)
# Gaps: 37/182 (20.3%)
# Score: 438.0
#
#
#=======================================
BSNT_01642 1 MLLQSDDEFHNFQFRSEKNNKLVQDTVHILNYSHNYNVMVGRDIDGAE-T 49
..:..|..|||| .
BPUM_0905___c 1 ------------------------------------MTVRRRCSDGAEKK 14
BSNT_01642 50 YRISELAALAGVTKRTVDYYTNLGLLTPARSCSNYRYYDENALKRLIFIV 99
|||.|||.:|.|||||||||||||||.|.|||||||||||:|||||..||
BPUM_0905___c 15 YRIGELAQIAQVTKRTVDYYTNLGLLAPVRSCSNYRYYDEHALKRLQLIV 64
BSNT_01642 100 DCKKQRLALSDIKDRLENQFPSSAKLDDEIGNLALEIDHMNQNISGILHR 149
.||:|||||||||.||:.||||..:..||:.:|..:||.||:::..||.|
BPUM_0905___c 65 LCKQQRLALSDIKSRLDEQFPSQKEASDELVHLTSDIDRMNEHMDRILVR 114
BSNT_01642 150 FERLKPEDRDKLKSKLPPEKLAVFQSFMLLLS 181
.::|:||.|:|||.:|.|||:...|||:||||
BPUM_0905___c 115 CKQLEPEQREKLKEQLTPEKMTAVQSFLLLLS 146
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