Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01637 and BPUM_0901
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:08
# Commandline: needle
# -asequence pep-align/BSNT_01637___yhdL.1.24716.seq
# -bsequence pep-align/BPUM_0901___yhdL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01637___yhdL-BPUM_0901___yhdL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01637___yhdL-BPUM_0901___yhdL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01637___yhdL
# 2: BPUM_0901___yhdL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity: 213/361 (59.0%)
# Similarity: 273/361 (75.6%)
# Gaps: 12/361 ( 3.3%)
# Score: 1107.5
#
#
#=======================================
BSNT_01637___ 1 -MNEEFKKRFDQYKNGEMSDQEMTAFEEELEKLE--VYQELIDSELEDDN 47
|||||.||::||.||||:::||.|||||||:.| :.||| :|:
BPUM_0901___y 1 MMNEEFNKRWEQYNNGEMNEEEMMAFEEELEENEKRLSQEL------NDS 44
BSNT_01637___ 48 DW-DLSISPEKQKAILAYGKRKSYLRISVLAVISTLMILPLCTLGSYLYY 96
|| |.|||||||||||.|||||||||||||||||||:|||||||||||||
BPUM_0901___y 45 DWTDFSISPEKQKAILQYGKRKSYLRISVLAVISTLIILPLCTLGSYLYY 94
BSNT_01637___ 97 GMGGKHSTGNEFMETAAVTVALTMPNVLVDTSGLKSQVKLFGMNTEFPLQ 146
|:||..|.||.||||||||||||.|||.:|...||.||||||||||..||
BPUM_0901___y 95 GVGGAESKGNHFMETAAVTVALTKPNVAIDMKDLKGQVKLFGMNTELKLQ 144
BSNT_01637___ 147 KQIGTKTAAVGNERVEMFYNKVKAPAVNYYDLEVNITGHYFTHPSNKSEQ 196
||||.||.|:|:|::|||::|:|.|.::||......|..:|||||.:::.
BPUM_0901___y 145 KQIGNKTEAIGSEQIEMFFDKLKQPTISYYGDSSRDTEDFFTHPSTQADA 194
BSNT_01637___ 197 TTAKAEKTLSTLPEGTVSEVYLSYDRAYPTKDVYNKFKGYDVSFLWNAIE 246
:..:...||..||||||||||:|||:||..||||:..|.||:..|||||:
BPUM_0901___y 195 SKKQTLTTLDKLPEGTVSEVYVSYDKAYTPKDVYSFAKKYDMKVLWNAIK 244
BSNT_01637___ 247 TEKNTNKTASTEPLGYPGKDSKFLAALNTKGKSNGDQFINALKFMSKHEK 296
||.:. :.:..|:|:||:||:||..|....|:..|||.:||.::::|..
BPUM_0901___y 245 TEDSL--SGNQRPIGFPGRDSEFLKELQHTSKTEVDQFKDALTYVNQHPT 292
BSNT_01637___ 297 WAQVISKRKDLNVDNRLDYVEKNGVNVYGSVVTGPTKEIQRMLKNKSVKS 346
||:.||.|.:|::.||:.|:.:|||.:||||:|||:|||::.:|.|.:|:
BPUM_0901___y 293 WAKTISGRPELDLSNRIRYINQNGVTIYGSVITGPSKEIEKFVKTKRIKT 342
BSNT_01637___ 347 ANVGEVELWNW 357
|.|.|||||||
BPUM_0901___y 343 AKVSEVELWNW 353
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