Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01637 and BPUM_0901

See DNA alignment / Visit BSNT_01637 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence pep-align/BSNT_01637___yhdL.1.24716.seq
#    -bsequence pep-align/BPUM_0901___yhdL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01637___yhdL-BPUM_0901___yhdL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01637___yhdL-BPUM_0901___yhdL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01637___yhdL
# 2: BPUM_0901___yhdL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity:     213/361 (59.0%)
# Similarity:   273/361 (75.6%)
# Gaps:          12/361 ( 3.3%)
# Score: 1107.5
# 
#
#=======================================

BSNT_01637___      1 -MNEEFKKRFDQYKNGEMSDQEMTAFEEELEKLE--VYQELIDSELEDDN     47
                      |||||.||::||.||||:::||.|||||||:.|  :.|||      :|:
BPUM_0901___y      1 MMNEEFNKRWEQYNNGEMNEEEMMAFEEELEENEKRLSQEL------NDS     44

BSNT_01637___     48 DW-DLSISPEKQKAILAYGKRKSYLRISVLAVISTLMILPLCTLGSYLYY     96
                     || |.|||||||||||.|||||||||||||||||||:|||||||||||||
BPUM_0901___y     45 DWTDFSISPEKQKAILQYGKRKSYLRISVLAVISTLIILPLCTLGSYLYY     94

BSNT_01637___     97 GMGGKHSTGNEFMETAAVTVALTMPNVLVDTSGLKSQVKLFGMNTEFPLQ    146
                     |:||..|.||.||||||||||||.|||.:|...||.||||||||||..||
BPUM_0901___y     95 GVGGAESKGNHFMETAAVTVALTKPNVAIDMKDLKGQVKLFGMNTELKLQ    144

BSNT_01637___    147 KQIGTKTAAVGNERVEMFYNKVKAPAVNYYDLEVNITGHYFTHPSNKSEQ    196
                     ||||.||.|:|:|::|||::|:|.|.::||......|..:|||||.:::.
BPUM_0901___y    145 KQIGNKTEAIGSEQIEMFFDKLKQPTISYYGDSSRDTEDFFTHPSTQADA    194

BSNT_01637___    197 TTAKAEKTLSTLPEGTVSEVYLSYDRAYPTKDVYNKFKGYDVSFLWNAIE    246
                     :..:...||..||||||||||:|||:||..||||:..|.||:..|||||:
BPUM_0901___y    195 SKKQTLTTLDKLPEGTVSEVYVSYDKAYTPKDVYSFAKKYDMKVLWNAIK    244

BSNT_01637___    247 TEKNTNKTASTEPLGYPGKDSKFLAALNTKGKSNGDQFINALKFMSKHEK    296
                     ||.:.  :.:..|:|:||:||:||..|....|:..|||.:||.::::|..
BPUM_0901___y    245 TEDSL--SGNQRPIGFPGRDSEFLKELQHTSKTEVDQFKDALTYVNQHPT    292

BSNT_01637___    297 WAQVISKRKDLNVDNRLDYVEKNGVNVYGSVVTGPTKEIQRMLKNKSVKS    346
                     ||:.||.|.:|::.||:.|:.:|||.:||||:|||:|||::.:|.|.:|:
BPUM_0901___y    293 WAKTISGRPELDLSNRIRYINQNGVTIYGSVITGPSKEIEKFVKTKRIKT    342

BSNT_01637___    347 ANVGEVELWNW    357
                     |.|.|||||||
BPUM_0901___y    343 AKVSEVELWNW    353


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