Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00559 and BPUM_0899

See DNA alignment / Visit BSNT_00559 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:22
# Commandline: needle
#    -asequence pep-align/BSNT_00559.1.24716.seq
#    -bsequence pep-align/BPUM_0899.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00559-BPUM_0899.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00559-BPUM_0899.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00559
# 2: BPUM_0899
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     230/286 (80.4%)
# Similarity:   254/286 (88.8%)
# Gaps:          17/286 ( 5.9%)
# Score: 1262.0
# 
#
#=======================================

BSNT_00559         1 MKAARFEAVHELKDRYPITWLVCIAKVSRSGYYKWRKAQRFRMARQQRDQ     50
                                      :|||.|||||||||||||||.|:.||.||.::|
BPUM_0899          1 -----------------MTWLTCIAKVSRSGYYKWRKNQKIRMERQLKEQ     33

BSNT_00559        51 IIKEHIMAIHHSRPFYGYPRITVALKKEGFCVNHKRVYRLMREMNIHSII    100
                     .:||||||||||||||||||:|:|||||||.:|||||||||:||||.|||
BPUM_0899         34 TLKEHIMAIHHSRPFYGYPRVTIALKKEGFHINHKRVYRLMKEMNIQSII     83

BSNT_00559       101 RKKRRYFGRKASVVLPNRLNREFQTNQPNQLYVTDITYIACGQRFYYLSA    150
                     |||||||||:|||:.||||||:|:|||.|||||||||||||...||||||
BPUM_0899         84 RKKRRYFGRQASVIHPNRLNRKFKTNQFNQLYVTDITYIACQHHFYYLSA    133

BSNT_00559       151 VQDLYNNEVVAWKLSKRNDLELVMKTVESLTAQRDVQGAILHSDQGFQYT    200
                     :|||||||:|||||||||||||||:|:||||:||||:||:||||||||||
BPUM_0899        134 IQDLYNNEIVAWKLSKRNDLELVMETLESLTSQRDVKGAVLHSDQGFQYT    183

BSNT_00559       201 TKAYQKRLETVGLKGSHSRKGNCLDNACIESFFSHLKTENTYFSSCQTEK    250
                     |||||||||.|||||||||:||||||||||||||||||||||||||||||
BPUM_0899        184 TKAYQKRLENVGLKGSHSRRGNCLDNACIESFFSHLKTENTYFSSCQTEK    233

BSNT_00559       251 ELHKSIKDYIQFYNHERFQKKLNQCAPVEYRNTLVA    286
                     ||||||:||||||||:|||||||||||||||:||.|
BPUM_0899        234 ELHKSIEDYIQFYNHDRFQKKLNQCAPVEYRHTLAA    269


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