Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00559 and BPUM_0899
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:22
# Commandline: needle
# -asequence dna-align/BSNT_00559.1.24716.seq
# -bsequence dna-align/BPUM_0899.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00559-BPUM_0899.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00559-BPUM_0899.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00559
# 2: BPUM_0899
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 863
# Identity: 687/863 (79.6%)
# Similarity: 687/863 (79.6%)
# Gaps: 55/863 ( 6.4%)
# Score: 2921.0
#
#
#=======================================
BSNT_00559 1 TTGAAGGCAGCACGATTTGAAGCTGTTCACGAATTGAAGGACCGTTATCC 50
BPUM_0899 0 -------------------------------------------------- 0
BSNT_00559 51 GATT-ACGTGGCTGGTATGTATCGCCAAAGTGTCACGGTCAGGGTACTAT 99
|| ||.|||||....||||||||||||||.|||||.||.|||||||||
BPUM_0899 1 --TTGACATGGCTCACCTGTATCGCCAAAGTATCACGATCGGGGTACTAT 48
BSNT_00559 100 AAATGGCGCAAGGCTCAAAGGTTTCGAATGGCAAGGCAACAGAGAGATCA 149
||.|||||.|||..|||||.|.|||||||||.|.|.||.|.||.|||.||
BPUM_0899 49 AAGTGGCGTAAGAATCAAAAGATTCGAATGGAACGACAGCTGAAAGAACA 98
BSNT_00559 150 GATCATAAAAGAGCACATCATGGCGATTCATCATTCACGCCCTTTCTATG 199
.|.|.|||||||.|||||||||||.||||||||||||.|.||.|||||||
BPUM_0899 99 AACCCTAAAAGAACACATCATGGCCATTCATCATTCAAGACCCTTCTATG 148
BSNT_00559 200 GCTATCCTCGGATTACTGTCGCTTTAAAGAAAGAAGG-TTTCTGCGTCAA 248
|||||||||||.|.||..||||||||||||||||||| |||| .|.||||
BPUM_0899 149 GCTATCCTCGGGTGACAATCGCTTTAAAGAAAGAAGGATTTC-ACATCAA 197
BSNT_00559 249 CCATAAGCGTGTTTACAGATTGATGAGAGAGATGAACATCCACTCGATTA 298
||||||||||||.|||||.|||||||.|||||||||||||||.||.||.|
BPUM_0899 198 CCATAAGCGTGTCTACAGGTTGATGAAAGAGATGAACATCCAATCAATCA 247
BSNT_00559 299 TTCGAAAAAAGCGTCGTTATTTTGGAAGAAAGGCATCGGTTGTCCTGCCA 348
||||||||||||||||.||||||||||||.|.||.||.|||.|||..|||
BPUM_0899 248 TTCGAAAAAAGCGTCGGTATTTTGGAAGACAAGCTTCAGTTATCCATCCA 297
BSNT_00559 349 AACCGGCTTAACCGAGAATTTCAAACCAATCAGCCTAATCAGTTATATGT 398
||..|..|.||||||.|||||.||||||||||....|||||||||||.||
BPUM_0899 298 AATAGATTAAACCGAAAATTTAAAACCAATCAATTCAATCAGTTATACGT 347
BSNT_00559 399 AACCGATATTACCTATATTGCTTGCGGACAACGATTCTATTATCTTTCTG 448
|||.||||||||||||||.||||||...||.|..||||||||||||||.|
BPUM_0899 348 AACTGATATTACCTATATCGCTTGCCAGCATCACTTCTATTATCTTTCAG 397
BSNT_00559 449 CAGTACAAGATCTTTACAACAATGAGGTTGTCGCATGGAAACTGTCAAAG 498
|..||||||||||.||.||||||||..||||||||||||||||||||||.
BPUM_0899 398 CTATACAAGATCTATATAACAATGAAATTGTCGCATGGAAACTGTCAAAA 447
BSNT_00559 499 CGAAATGATCTTGAACTGGTGATGAAAACAGTGGAAAGTTTAACAGCTCA 548
|||||||||||||||.||||.|||.|.|||.|.||.|||||.|||.|.||
BPUM_0899 448 CGAAATGATCTTGAATTGGTCATGGAGACATTAGAGAGTTTGACATCCCA 497
BSNT_00559 549 ACGGGATGTCCAAGGGGCCATTCTCCACTCTGATCAAGGATTCCAATACA 598
||||||||||.||||.||..|.||.||.||.|||||||||||||||||||
BPUM_0899 498 ACGGGATGTCAAAGGAGCTGTACTTCATTCAGATCAAGGATTCCAATACA 547
BSNT_00559 599 CAACAAAAGCATATCAAAAGCGACTTGAAACCGTTGGTTTGAAGGGCAGC 648
|||||||||||||||||||||||||.||||.||||||||||||||||||.
BPUM_0899 548 CAACAAAAGCATATCAAAAGCGACTAGAAAACGTTGGTTTGAAGGGCAGT 597
BSNT_00559 649 CATTCCCGTAAGGGAAACTGCCTGGATAACGCCTGTATCGAATCATTTTT 698
||||||||.|.||||||||||||.|||||.||||||||||||||||||||
BPUM_0899 598 CATTCCCGAAGGGGAAACTGCCTAGATAATGCCTGTATCGAATCATTTTT 647
BSNT_00559 699 CTCGCACCTCAAAACAGAGAATACATACTTTTCTTCATGCCAAACTGAAA 748
|||.||.||||||||||||||.||.|||||||||||.||.|||||.||||
BPUM_0899 648 CTCCCATCTCAAAACAGAGAACACTTACTTTTCTTCGTGTCAAACGGAAA 697
BSNT_00559 749 AAGAGCTCCACAAAAGCATTAAAGATTACATCCAGTTCTATAATCACGAA 798
|||||||.||.||||||||..||||||||||.||.||||||||||||||.
BPUM_0899 698 AAGAGCTTCATAAAAGCATAGAAGATTACATTCAATTCTATAATCACGAT 747
BSNT_00559 799 CGATTCCAGAAAAAATTAAACCAGTGTGCTCCGGTAGAATACCGTAACAC 848
.|||||||||||||||||||||||||.||||||||||||||||||.||||
BPUM_0899 748 AGATTCCAGAAAAAATTAAACCAGTGCGCTCCGGTAGAATACCGTCACAC 797
BSNT_00559 849 ACTGGTTGCTTAG 861
|||||..||||||
BPUM_0899 798 ACTGGCAGCTTAG 810
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