Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00560 and BPUM_0898

See DNA alignment / Visit BSNT_00560 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:22
# Commandline: needle
#    -asequence pep-align/BSNT_00560.1.24716.seq
#    -bsequence pep-align/BPUM_0898___orfX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00560-BPUM_0898___orfX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00560-BPUM_0898___orfX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00560
# 2: BPUM_0898___orfX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      90/110 (81.8%)
# Similarity:   100/110 (90.9%)
# Gaps:           3/110 ( 2.7%)
# Score: 476.0
# 
#
#=======================================

BSNT_00560         1 MARKGQHFQHYTKEFKMKAVKMYEEGNKSYNTLAEELGLRSSTQLKNWVK     50
                     ||||||.||||:||||:|||||||||||||.:|:||||:|||||||:||:
BPUM_0898___o      1 MARKGQQFQHYSKEFKIKAVKMYEEGNKSYQSLSEELGIRSSTQLKSWVR     50

BSNT_00560        51 TYREGKSFDDQRGKDTKSDNPFIGRPKTTFKSVEEERDYLKAQVEYLKKR    100
                     .||||:||:||||   .|.|||.||||:.|||||||||||||||||||||
BPUM_0898___o     51 KYREGQSFEDQRG---TSVNPFRGRPKSIFKSVEEERDYLKAQVEYLKKR     97

BSNT_00560       101 YPNLHGEDGF    110
                     ||||||||||
BPUM_0898___o     98 YPNLHGEDGF    107


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