Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00560 and BPUM_0898

See Amino acid alignment / Visit BSNT_00560 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:22
# Commandline: needle
#    -asequence dna-align/BSNT_00560.1.24716.seq
#    -bsequence dna-align/BPUM_0898___orfX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00560-BPUM_0898___orfX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00560-BPUM_0898___orfX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00560
# 2: BPUM_0898___orfX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     274/334 (82.0%)
# Similarity:   274/334 (82.0%)
# Gaps:          11/334 ( 3.3%)
# Score: 1130.5
# 
#
#=======================================

BSNT_00560         1 ATGGCGAGAAAAGGGCAACACTTTCAGCACTATACGAAAGAATTTAAGAT     50
                     ||||||||||||||.|||||.|||||.||||||.||||||||||||||||
BPUM_0898___o      1 ATGGCGAGAAAAGGACAACAATTTCAACACTATTCGAAAGAATTTAAGAT     50

BSNT_00560        51 GAAAGCTGTCAAAATGTACGAGGAAGGAAACAAAAGCTATAACACGTTAG    100
                     .||||||||||||||||||||.||||||||||||||.|||.|..|.|||.
BPUM_0898___o     51 AAAAGCTGTCAAAATGTACGAAGAAGGAAACAAAAGTTATCAGTCATTAT    100

BSNT_00560       101 CTGAAGAATTAGGGCTTCGAAGTTCAACCCAGCTCAAAAATTGGGTGAAA    150
                     |||||||||||||..||.|||||||.||.|||.|.||||.||||||.|.|
BPUM_0898___o    101 CTGAAGAATTAGGTATTAGAAGTTCCACTCAGTTAAAAAGTTGGGTCAGA    150

BSNT_00560       151 ACATATCGGGAAGG-CAAGTCTTTTGATGATCAAAGGGGAAAAGATACAA    199
                     |.||||||.||.|| ||| ||||||||.||||||||      ||.|||| 
BPUM_0898___o    151 AAATATCGTGAGGGACAA-TCTTTTGAAGATCAAAG------AGGTACA-    192

BSNT_00560       200 AGTCAGACAATCCTTTTATTGGACGCCCTAAAACAACGTTTAAAAGTGTT    249
                       ||||.||||||.||||..|||||.|||||..|.|..|||||||||||.
BPUM_0898___o    193 --TCAGTCAATCCGTTTAGGGGACGTCCTAAGTCCATATTTAAAAGTGTA    240

BSNT_00560       250 GAGGAAGAACGAGATTATTTAAAGGCACAGGTCGAATACCTAAAAAAGCG    299
                     ||.|||||..|||||||.||||||||||||||.||||||.||||||||||
BPUM_0898___o    241 GAAGAAGAGAGAGATTACTTAAAGGCACAGGTAGAATACTTAAAAAAGCG    290

BSNT_00560       300 CTATCCAAATCTGCATGGGGAGGACGGATTTTGA    333
                     .||.||||||||.||.||||||||||||||||.|
BPUM_0898___o    291 TTACCCAAATCTTCACGGGGAGGACGGATTTTAA    324


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