Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02196 and BPUM_0894

See DNA alignment / Visit BSNT_02196 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence pep-align/BSNT_02196___hmp.1.24716.seq
#    -bsequence pep-align/BPUM_0894___hmp.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02196___hmp-BPUM_0894___hmp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02196___hmp-BPUM_0894___hmp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02196___hmp
# 2: BPUM_0894___hmp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity:     166/404 (41.1%)
# Similarity:   236/404 (58.4%)
# Gaps:          10/404 ( 2.5%)
# Score: 792.5
# 
#
#=======================================

BSNT_02196___      1 MLDNKTIEIIKSTVPVLQQHGETITGRFYDRMFQDHPELLNIFNQTNQKK     50
                     ||....:..||.:.|:|:..|..:...||..|.:.||||||.||:||...
BPUM_0894___h      1 MLSKDQMNAIKQSAPLLKAEGTKLVTVFYQNMIRQHPELLNQFNKTNLMN     50

BSNT_02196___     51 KTQRIALANAVIAAAANIDQLGNIIPVVKQIGHKHRSIGIKPEHYPIVGK    100
                     .:|..|||..:..||.:||:|..::||||||.|||.|:.:|.|.|||||.
BPUM_0894___h     51 GSQPEALAATLYQAALHIDRLEELLPVVKQIAHKHVSVMVKKEQYPIVGY    100

BSNT_02196___    101 YLLIAIKDVLGDAATPDIMQAWEKAYGVIADAFIGIEKDMYEQAEEQAGG    150
                     :|:..:|:|.|.....|.:.||:.||.:||:.||.||.:|.|:..:|.||
BPUM_0894___h    101 HLIEGMKEVFGLTEKDDTLLAWKAAYDIIANIFITIEAEMMEENVKQIGG    150

BSNT_02196___    151 WKEYKPFAIAKKERESKEITSFYLKPEDGKPLPEFQAGQYISIKVRIPDF    200
                     |.:.|||.|.||.:||..:.||||.|||...||.|:|||||:::..:|..
BPUM_0894___h    151 WSDVKPFVIKKKVQESPALISFYLVPEDESELPMFEAGQYITVQADMPGE    200

BSNT_02196___    201 EYTHIRQYSLSDMPGKDYYRISVKKDGVVSSYLHDGLQEGDSIEISAPAG    250
                     .|...|||||||.....||||:||:||.||::|||.::|||.:::|.|.|
BPUM_0894___h    201 AYMCSRQYSLSDQHHPSYYRITVKRDGHVSTFLHDEMEEGDVLQVSMPQG    250

BSNT_02196___    251 DFVLDHASQKDLVLISAGVGITPMISMLKTSVSKQPERQILFIHAAKNSE    300
                     .|.|...:::.:..||||.|:||||.:|||:.  |.......|||.:..:
BPUM_0894___h    251 MFCLQEDTKEPVYFISAGSGVTPMIGLLKTAA--QNSHPFTMIHADRLED    298

BSNT_02196___    301 YHALRHEVE---EAAKHSAVKTAFVYREPTEEDRAGDL-HFHEGQIDQQF    346
                     ..|..||.|   .:|.|..:   .:..|...:...|:| .....:||:.|
BPUM_0894___h    299 VTAFEHEFESVLSSAPHGRI---LLCNEQFAQSGKGELVEKAASRIDRSF    345

BSNT_02196___    347 LKELIANTDADYYICGSPSFITAMHKLVSELGSAPESIHYELFGPQLSLA    396
                     |:.::......:|:||||.|...|..::.|||...::||:|.||.|.:..
BPUM_0894___h    346 LQSVVGEGKGQFYLCGSPVFTEEMIHILKELGIPEQNIHFESFGGQSTKE    395

BSNT_02196___    397 QSV-    399
                     ..| 
BPUM_0894___h    396 MEVV    399


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.