Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02196 and BPUM_0894
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence pep-align/BSNT_02196___hmp.1.24716.seq
# -bsequence pep-align/BPUM_0894___hmp.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02196___hmp-BPUM_0894___hmp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02196___hmp-BPUM_0894___hmp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02196___hmp
# 2: BPUM_0894___hmp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 166/404 (41.1%)
# Similarity: 236/404 (58.4%)
# Gaps: 10/404 ( 2.5%)
# Score: 792.5
#
#
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BSNT_02196___ 1 MLDNKTIEIIKSTVPVLQQHGETITGRFYDRMFQDHPELLNIFNQTNQKK 50
||....:..||.:.|:|:..|..:...||..|.:.||||||.||:||...
BPUM_0894___h 1 MLSKDQMNAIKQSAPLLKAEGTKLVTVFYQNMIRQHPELLNQFNKTNLMN 50
BSNT_02196___ 51 KTQRIALANAVIAAAANIDQLGNIIPVVKQIGHKHRSIGIKPEHYPIVGK 100
.:|..|||..:..||.:||:|..::||||||.|||.|:.:|.|.|||||.
BPUM_0894___h 51 GSQPEALAATLYQAALHIDRLEELLPVVKQIAHKHVSVMVKKEQYPIVGY 100
BSNT_02196___ 101 YLLIAIKDVLGDAATPDIMQAWEKAYGVIADAFIGIEKDMYEQAEEQAGG 150
:|:..:|:|.|.....|.:.||:.||.:||:.||.||.:|.|:..:|.||
BPUM_0894___h 101 HLIEGMKEVFGLTEKDDTLLAWKAAYDIIANIFITIEAEMMEENVKQIGG 150
BSNT_02196___ 151 WKEYKPFAIAKKERESKEITSFYLKPEDGKPLPEFQAGQYISIKVRIPDF 200
|.:.|||.|.||.:||..:.||||.|||...||.|:|||||:::..:|..
BPUM_0894___h 151 WSDVKPFVIKKKVQESPALISFYLVPEDESELPMFEAGQYITVQADMPGE 200
BSNT_02196___ 201 EYTHIRQYSLSDMPGKDYYRISVKKDGVVSSYLHDGLQEGDSIEISAPAG 250
.|...|||||||.....||||:||:||.||::|||.::|||.:::|.|.|
BPUM_0894___h 201 AYMCSRQYSLSDQHHPSYYRITVKRDGHVSTFLHDEMEEGDVLQVSMPQG 250
BSNT_02196___ 251 DFVLDHASQKDLVLISAGVGITPMISMLKTSVSKQPERQILFIHAAKNSE 300
.|.|...:::.:..||||.|:||||.:|||:. |.......|||.:..:
BPUM_0894___h 251 MFCLQEDTKEPVYFISAGSGVTPMIGLLKTAA--QNSHPFTMIHADRLED 298
BSNT_02196___ 301 YHALRHEVE---EAAKHSAVKTAFVYREPTEEDRAGDL-HFHEGQIDQQF 346
..|..||.| .:|.|..: .:..|...:...|:| .....:||:.|
BPUM_0894___h 299 VTAFEHEFESVLSSAPHGRI---LLCNEQFAQSGKGELVEKAASRIDRSF 345
BSNT_02196___ 347 LKELIANTDADYYICGSPSFITAMHKLVSELGSAPESIHYELFGPQLSLA 396
|:.::......:|:||||.|...|..::.|||...::||:|.||.|.:..
BPUM_0894___h 346 LQSVVGEGKGQFYLCGSPVFTEEMIHILKELGIPEQNIHFESFGGQSTKE 395
BSNT_02196___ 397 QSV- 399
..|
BPUM_0894___h 396 MEVV 399
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