Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01615 and BPUM_0893

See DNA alignment / Visit BSNT_01615 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:07
# Commandline: needle
#    -asequence pep-align/BSNT_01615___yhdE.1.24716.seq
#    -bsequence pep-align/BPUM_0893___yhdE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01615___yhdE-BPUM_0893___yhdE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01615___yhdE-BPUM_0893___yhdE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01615___yhdE
# 2: BPUM_0893___yhdE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:     101/146 (69.2%)
# Similarity:   117/146 (80.1%)
# Gaps:           3/146 ( 2.1%)
# Score: 522.0
# 
#
#=======================================

BSNT_01615___      1 MKLTNYTDYSLRVLIFLAAERPGELSNIKQIAETYSISKNHLMKVIYRLG     50
                     ||||||||:||||||:||:....|||||:|||:.|.||||||.||||.||
BPUM_0893___y      1 MKLTNYTDFSLRVLIYLASRENNELSNIQQIADVYDISKNHLTKVIYHLG     50

BSNT_01615___     51 QLGYVETIRGRGGGIRLGMEPEDINIGEVVRKTEDDFNIVECFDANKNLC    100
                     :.|||||||||.||||||..||.||||||||.||||..:|||||..||.|
BPUM_0893___y     51 KRGYVETIRGRNGGIRLGKSPESINIGEVVRYTEDDLVMVECFDPRKNSC    100

BSNT_01615___    101 VISPVCGLKHVLNEALLAYLAVLDKYTLRDLVKNKEDIMKLLKMKE    146
                     :|||:|.|||||:|||.|||.|||:|||:||.:||:.:.:||.   
BPUM_0893___y    101 IISPICSLKHVLHEALSAYLRVLDQYTLKDLTQNKDALRELLL---    143


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