Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01610 and BPUM_0890

See DNA alignment / Visit BSNT_01610 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:07
# Commandline: needle
#    -asequence pep-align/BSNT_01610___yhdB.1.24716.seq
#    -bsequence pep-align/BPUM_0890___yhdB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01610___yhdB-BPUM_0890___yhdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01610___yhdB-BPUM_0890___yhdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01610___yhdB
# 2: BPUM_0890___yhdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 93
# Identity:      56/93 (60.2%)
# Similarity:    66/93 (71.0%)
# Gaps:          13/93 (14.0%)
# Score: 284.5
# 
#
#=======================================

BSNT_01610___      1 -----------MDYADYDKALYYTHRSQWDNLLILMVRTEDDLLSKRIEH     39
                                |:.|||||||||||||||||||||||||:||||||||||
BPUM_0890___y      1 MRTSQGKGEGLMNVADYDKALYYTHRSQWDNLLILMVRTQDDLLSKRIEH     50

BSNT_01610___     40 FLHAYHFEQDYAVLEKMLYSLLRYIDHATELTYEDQIA--LLT     80
                     |||||.|.::.|.:||.||.||:|||||:|....:..:  :.|
BPUM_0890___y     51 FLHAYQFNRNDADVEKCLYGLLQYIDHASEAAAAEVYSQPMYT     93


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