Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01607 and BPUM_0887
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence pep-align/BSNT_01607___yhcZ.1.24716.seq
# -bsequence pep-align/BPUM_0887___yhcZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01607___yhcZ-BPUM_0887___yhcZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01607___yhcZ-BPUM_0887___yhcZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01607___yhcZ
# 2: BPUM_0887___yhcZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 125/220 (56.8%)
# Similarity: 167/220 (75.9%)
# Gaps: 9/220 ( 4.1%)
# Score: 637.5
#
#
#=======================================
BSNT_01607___ 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGIEALRVIEETKPDLV 50
|::|||||||:|||||.||..||.|:|:||||:.|.|||.::.:|:||:|
BPUM_0887___y 1 MRVVIADDHHIVRKGLVFFLQTQPDVEIVGEASNGEEALEIVRQTRPDIV 50
BSNT_01607___ 51 LMDLSMPEMDGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAY 100
|||||||.|:||:|.|:...:.|||.|::||||:|:::||||:|||||||
BPUM_0887___y 51 LMDLSMPVMNGIEATKQMTLEMPDTRIVILTSYADKDYVIPAIQAGAKAY 100
BSNT_01607___ 101 QLKDTEPEELVKTLRQVHGGEYKLSTAIMPHVLTHMKNQHDPEKEKYYQL 150
||||..||:|:.|:..|..|.|:|...|...::.|:....:.:.|...:|
BPUM_0887___y 101 QLKDVAPEKLLTTMIDVQKGTYQLDGHITNFLVQHLTEPKEQKWELMKEL 150
BSNT_01607___ 151 TRREKDVLTEIANGKSNKEIAAALFISEKTVKTHVSNLLAKLEVADRTQA 200
|.||:|||.|||.||||||||::|||||||||||||::|:|||:||||||
BPUM_0887___y 151 TNRERDVLFEIAKGKSNKEIASSLFISEKTVKTHVSHVLSKLELADRTQA 200
BSNT_01607___ 201 ALFAVKYNLNGEISK----- 215
||:||.| :.|:
BPUM_0887___y 201 ALYAVDY----QKSQPKELL 216
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