Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01605 and BPUM_0886
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence pep-align/BSNT_01605___yhcY.1.24716.seq
# -bsequence pep-align/BPUM_0886___yhcY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01605___yhcY-BPUM_0886___yhcY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01605___yhcY-BPUM_0886___yhcY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01605___yhcY
# 2: BPUM_0886___yhcY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity: 213/388 (54.9%)
# Similarity: 274/388 (70.6%)
# Gaps: 10/388 ( 2.6%)
# Score: 1074.0
#
#
#=======================================
BSNT_01605___ 1 ---MSKM-----RMEKLKTLKTIAETLNQGHDIKATLDEVLKELLSLTNL 42
:::| ::|.|||||.|||.||:|.::|.||.|||..|:.:|..
BPUM_0886___y 1 MPGVNRMGEYQEKVETLKTLKEIAEKLNEGTEMKDTLHEVLHMLMDVTGF 50
BSNT_01605___ 43 QSGWIFLIEEDGSYTLAADAYLPPALSRKEKVLMCEGECYCLTKFNNGGL 92
.|.||:.||:||||.|.|:..||.||:..:|.|||:.:|||:.::..|.|
BPUM_0886___y 51 HSAWIYFIEKDGSYELMAEVSLPEALATHQKELMCQNDCYCINRYTKGSL 100
BSNT_01605___ 93 RKAANIMNCKRIESAENLHCFDTEGITHHATVPLEDGDRRFGLLNVAAAG 142
:.|.|||||||||:|......|||||||||||||:...|.||||||||.|
BPUM_0886___y 101 QSATNIMNCKRIETAMKKKLGDTEGITHHATVPLKACKRTFGLLNVAAKG 150
BSNT_01605___ 143 KTMFDEEELHLLESVAFQIGTAIQRMRLSEYQQKNALLMERNRLAQELHD 192
|..|.:|||:||||:|.|||||||||:|.:.:.::|||.|||||||:|||
BPUM_0886___y 151 KVTFTQEELNLLESIALQIGTAIQRMKLVQNEHQHALLEERNRLAQDLHD 200
BSNT_01605___ 193 SVNQMLFSVSLTAKAAKTLTKDENLQQMIEFIQNLSQDALAEMKALIWQL 242
||||||||||||||||:.:|.|:||.:||:|||:||||||.||::|||||
BPUM_0886___y 201 SVNQMLFSVSLTAKAARQMTNDQNLGEMIDFIQHLSQDALVEMRSLIWQL 250
BSNT_01605___ 243 RPGGLEKGLAEAIKSYGALIGLKIIFTQKGCPVLTDEQEHMLWRVVQEAL 292
||.|||||....|:.|..|:||:...:..||..:...|...|:||.||||
BPUM_0886___y 251 RPRGLEKGFTTGIQEYAKLLGLRCTLSLSGCMEMDHSQHETLFRVCQEAL 300
BSNT_01605___ 293 NNCKKHAGTDTAYVSLTASLCHAELDIIDHGAGFRYEAHAGLPSLGIKGM 342
|||:|||..:...|.|..|....|:.|||||.||:|:....|||||:|||
BPUM_0886___y 301 NNCQKHAEVEEVKVQLEQSKDTFEMKIIDHGKGFQYDEQMNLPSLGLKGM 350
BSNT_01605___ 343 KERAEKAGAKFWIESALGTGTKLSIRLPLT-SRKGGAV 379
.:|.::||..|.|||.||.||.:.:::|.: .|||.:
BPUM_0886___y 351 SDRIKRAGGTFCIESELGKGTTIQVKVPFSQERKGSS- 387
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