Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01589 and BPUM_0873

See DNA alignment / Visit BSNT_01589 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:06
# Commandline: needle
#    -asequence pep-align/BSNT_01589___yhcU.1.24716.seq
#    -bsequence pep-align/BPUM_0873___yhcU.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01589___yhcU-BPUM_0873___yhcU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01589___yhcU-BPUM_0873___yhcU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01589___yhcU
# 2: BPUM_0873___yhcU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:      37/133 (27.8%)
# Similarity:    64/133 (48.1%)
# Gaps:          19/133 (14.3%)
# Score: 159.5
# 
#
#=======================================

BSNT_01589___      1 MARKVIDVRIVNAATAEQESFIKELSMELIHDVFPLYFSELDIQRFKKKG     50
                            :|::.|||..||..|:|:|.: :.|:.....:..:....:|..
BPUM_0873___y      1 -------MRLMKAATDLQEQAIEEISKD-VEDLLSHAVNGQERDTRQKDR     42

BSNT_01589___     51 VLSLNNHYYQGTLKEAFQIMACLQMIHIILTKPSPHSDLSDQAIFEKNSK    100
                     .|:..:..|.||:.:||:|::.||::|.|:.||..|....|:.:||:|.:
BPUM_0873___y     43 SLTFIDGVYNGTMDDAFRILSGLQLLHTIIVKPKRHLTKRDRELFERNRE     92

BSNT_01589___    101 MLNDFGIYFPFAFSDFQKK--TNKAFFGQRRLI    131
                     .:|..|..|||...||..:  .|.         
BPUM_0873___y     93 QVNACGFSFPFDLDDFASRHLQNA---------    116


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