Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01587 and BPUM_0872

See DNA alignment / Visit BSNT_01587 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:05
# Commandline: needle
#    -asequence pep-align/BSNT_01587___yhcT.1.24716.seq
#    -bsequence pep-align/BPUM_0872___rluA1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01587___yhcT-BPUM_0872___rluA1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01587___yhcT-BPUM_0872___rluA1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01587___yhcT
# 2: BPUM_0872___rluA1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     174/302 (57.6%)
# Similarity:   220/302 (72.8%)
# Gaps:           0/302 ( 0.0%)
# Score: 916.0
# 
#
#=======================================

BSNT_01587___      1 MNQKGRGLEILINEKQDGQWLFSVLKTALKASKPVIQDWMSHQQIKVNHE     50
                     |..||..|.:.::|:.....|...||||:.||||:|..||.||::::|.:
BPUM_0872___r      1 MIIKGHTLSLKVDEQYHHTSLSHFLKTAVSASKPIIHFWMEHQKVRLNQK     50

BSNT_01587___     51 SVLNNMIVKKGDRVFIDLQESEASSVIPEYGELDILFEDNHMLIINKPAG    100
                     ...:...|.:||::.|||.|:|.|.|.||||||::||||.|:||:.||||
BPUM_0872___r     51 PAHHAAKVSQGDQIIIDLFETEESDVTPEYGELEVLFEDEHLLIVQKPAG    100

BSNT_01587___    101 IATHPNEDGQTGTLANLIAYHYQINGETCKVRHVHRLDQDTSGAIVFAKH    150
                     ..|||||.|||||||||:|:|:|.|||..:|||:|||||||||.::||||
BPUM_0872___r    101 RPTHPNEQGQTGTLANLVAFHFQANGEEKRVRHIHRLDQDTSGTVIFAKH    150

BSNT_01587___    151 RLAHAILDQQLEKKTLKRTYTAIAEGKLRTKKGTINSPIGRDRSHPTRRR    200
                     |||||.|||.|.|||:||||.|||||..:.|||||::.||||:.|..|||
BPUM_0872___r    151 RLAHAALDQMLSKKTIKRTYIAIAEGLFKKKKGTIDAAIGRDKHHAVRRR    200

BSNT_01587___    201 VSPGGQTAVTHFKVMASNAKERLSLVELELETGRTHQIRVHLASLGHPLT    250
                     :||.||.|||||:||..|.:.:|:.|:|:|||||||||||||:||||||.
BPUM_0872___r    201 ISPTGQKAVTHFQVMDVNKRLQLTAVKLQLETGRTHQIRVHLSSLGHPLA    250

BSNT_01587___    251 GDSLYGGGSKLLNRQALHANKVQAVHPITDELIVAEAPFPADMKNLCRTY    300
                     ||:||.|..:.:||.||||.:|...||.|.|.::.|||.|.||..|....
BPUM_0872___r    251 GDTLYDGVREYINRCALHAKQVDMKHPFTGEHLIIEAPLPPDMDQLMSQI    300

BSNT_01587___    301 FS    302
                     ..
BPUM_0872___r    301 IH    302


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