Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01543 and BPUM_0863
See
DNA alignment /
Visit
BSNT_01543 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence pep-align/BSNT_01543___yhcK.1.24716.seq
# -bsequence pep-align/BPUM_0863___yhcK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01543___yhcK-BPUM_0863___yhcK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01543___yhcK-BPUM_0863___yhcK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01543___yhcK
# 2: BPUM_0863___yhcK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity: 165/364 (45.3%)
# Similarity: 239/364 (65.7%)
# Gaps: 8/364 ( 2.2%)
# Score: 863.0
#
#
#=======================================
BSNT_01543___ 1 MLKELFVNFTILITFNYLFTHLFKERLVHKKDSISFQAVKGLACGLLGVI 50
||::||:|.|||:||:|||..:|||..:.|:|::..|..||:..|||||:
BPUM_0863___y 1 MLRDLFINLTILVTFHYLFMLVFKENFLKKEDTLLRQLCKGILSGLLGVL 50
BSNT_01543___ 51 LMVFGFTYQHSIIDLRNIPIMIAALYGGWVSTATALAMITAGRLLITMNT 100
||.|......:|||||:||:::.|.|||...|..|..::..|||||..|.
BPUM_0863___y 51 LMFFSIKAGPAIIDLRHIPLILTAFYGGIAQTIIAAVVVIIGRLLIEANI 100
BSNT_01543___ 101 SALYSVIIICIAAIPSLIVSRRKKVQLKHAFYLLI---ITNSLISFSFYF 147
::..::..:.|.|..|.:::.| .:.|...:|: |.|.:.:..|..
BPUM_0863___y 101 ASFINIFSMMIIATASFLIAER---HMNHVVKMLLSITIGNVIATSLFIM 147
BSNT_01543___ 148 LIDLHSYELHLYFWIISIAGGMLSLYIIDHETNAHLLFKQYKFQAHFDFL 197
::...|:|||..:|:.|....:.:.|:|:|:|.|:.|...||||||:|||
BPUM_0863___y 148 IVHETSFELHFTYWMFSYIAVLFNFYVIEHQTKAYQLLNLYKFQAHYDFL 197
BSNT_01543___ 198 TGVYNRRKFEETTKALYQQAADTPHFQFALIYMDIDHFKTINDQYGHHEG 247
|||.|:|||:|.....:......|..|.:|||:|||:||:||||||||||
BPUM_0863___y 198 TGVLNKRKFDEVLNDAFSMKFKHPTHQMSLIYLDIDYFKSINDQYGHHEG 247
BSNT_01543___ 248 DQVLKELGLRLKQSIRNTDPAARIGGEEFAVLLPNCSLDKAARIAERIRR 297
|.||||:|.||.::.|::|...|||||||||.||||:::|..:||||:||
BPUM_0863___y 248 DMVLKEIGKRLIKNTRSSDYIGRIGGEEFAVFLPNCTVEKTWQIAERLRR 297
BSNT_01543___ 298 TVSDAPIVLTNGEELSVTISLGAAHYPNNTEQPGSLPILADQMLYKAKET 347
.::|.|:.|.||..:.:|:|||.|:|...:.....|||:|||.|||||::
BPUM_0863___y 298 KIADQPVYLQNGMSIHITVSLGCAYYSGTSPDIKQLPIIADQELYKAKQS 347
BSNT_01543___ 348 GRNRVCFSEKKE-- 359
|||:|.||.:|.
BPUM_0863___y 348 GRNQVSFSGRKRGQ 361
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.