Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01528 and BPUM_0858

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_01528___yhbJ.1.24716.seq
#    -bsequence pep-align/BPUM_0858___yhbJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01528___yhbJ-BPUM_0858___yhbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01528___yhbJ-BPUM_0858___yhbJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01528___yhbJ
# 2: BPUM_0858___yhbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity:     156/221 (70.6%)
# Similarity:   183/221 (82.8%)
# Gaps:          11/221 ( 5.0%)
# Score: 826.0
# 
#
#=======================================

BSNT_01528___      1 MIEDETKGENKMNRGRLILTNIIGLIVVLAIIAGGAYYYYQSTNYVKTDE     50
                                ||||||:|||||||||:||||||||||||:|||:|||||
BPUM_0858___y      1 -----------MNRGRLLLTNIIGLIVILAIIAGGAYYYYESTNFVKTDE     39

BSNT_01528___     51 AKVAGDMAAITAPAAGKVSDWDLDEGKTVKKGDTVAKIKGEQTVDVKSIM    100
                     |||.|||..|||||||::..||::||..|:|..||||::||...::||:.
BPUM_0858___y     40 AKVTGDMYQITAPAAGQIKGWDINEGDEVQKDSTVAKVEGETKTNIKSVA     89

BSNT_01528___    101 DGTIVKNEVKNGQTVQAGTTIAQTIDMDNLYITANIKETDIADIEVGNSV    150
                     |||:||.||:|.|.||.||.:.:|||:..||||||||||||.:||.|:.|
BPUM_0858___y     90 DGTLVKKEVQNNQQVQPGTVLGETIDLSKLYITANIKETDIKNIEKGDKV    139

BSNT_01528___    151 DVVVDGDPDTTFDGTVEEIGYATNSTFDMLPSTNSSGNYTKVTQKIPVKI    200
                     |:||||||.|||:||||:|||||||||:|||:|||||||||||||:.|||
BPUM_0858___y    140 DIVVDGDPSTTFEGTVEQIGYATNSTFNMLPATNSSGNYTKVTQKVAVKI    189

BSNT_01528___    201 SIKNPSDKVLPGMNASVKISE    221
                     ||||||||||||||||||||.
BPUM_0858___y    190 SIKNPSDKVLPGMNASVKISS    210


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