Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01513 and BPUM_0846
See
DNA alignment /
Visit
BSNT_01513 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence pep-align/BSNT_01513___yhzB.1.24716.seq
# -bsequence pep-align/BPUM_0846___yhzB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01513___yhzB-BPUM_0846___yhzB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01513___yhzB-BPUM_0846___yhzB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01513___yhzB
# 2: BPUM_0846___yhzB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 88/210 (41.9%)
# Similarity: 123/210 (58.6%)
# Gaps: 15/210 ( 7.1%)
# Score: 391.0
#
#
#=======================================
BSNT_01513___ 1 MNIKLDSVITERAAGLHAAAVIYENIEVGSSPQMLKGRLRLFQESLFFDY 50
|.|.::....|..: :|...:.|.:||||:||||||||||||||||||:|
BPUM_0846___y 1 MKIHMEISHPENPS-IHVGKIEYSHIEVGTSPQMLKGRLRLFQESLFFEY 49
BSNT_01513___ 51 ADGGISDESFVKEWQELFKQLNPSFEGETTPMEDMLVPISKEQFMESIDS 100
.|..:.:...:|||.:|.|.: |...:|..|.||||::|.:|
BPUM_0846___y 50 EDKVLEEVPAIKEWTDLLKDV---------PFLPILADIQKEQFIDSTNS 90
BSNT_01513___ 101 AHDTIDFFALKYSLPIMIYDAGKLHEPVRISLGEKENILLFSDENGIFGD 150
..|...||:|||.|||:.:||.:|.||:.::..|..:| .:.|:.|:.|.
BPUM_0846___y 91 VQDLSIFFSLKYFLPILTFDADRLEEPLSLAKHETGHI-EWQDKAGLKGL 139
BSNT_01513___ 151 FKNNVNHYPVSNETKNMLQIIFFPPSIEKSSAVNLLSSLTKMFEQIHGGT 200
|......: :|..|||:||||.|||||.:..:..|:.||||||.|||||.
BPUM_0846___y 140 FSQPSKAH-ISQGTKNILQIILFPPSISREKSEALIQSLTKMFVQIHGGE 188
BSNT_01513___ 201 YTVHWLT--- 207
.....:.
BPUM_0846___y 189 SKYELIEKAL 198
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.