Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01515 and BPUM_0844

See DNA alignment / Visit BSNT_01515 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_01515___yhbB.1.24716.seq
#    -bsequence pep-align/BPUM_0844___yhbB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01515___yhbB-BPUM_0844___yhbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01515___yhbB-BPUM_0844___yhbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01515___yhbB
# 2: BPUM_0844___yhbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     186/306 (60.8%)
# Similarity:   233/306 (76.1%)
# Gaps:           7/306 ( 2.3%)
# Score: 1022.0
# 
#
#=======================================

BSNT_01515___      1 MKHILEQLAEERLGFLVNGHAMRQESQVGDLKVMERKKKLLEKRKVDIIK     50
                     ||.:||:..|:||.:|:|..|::|...:.|::.:||||:|..:|:|:|:|
BPUM_0844___y      1 MKQLLEKTLEDRLAYLINDRAIKQPQLMSDVEAVERKKELFARRQVEIVK     50

BSNT_01515___     51 AKAKAVINHVRVEDDGTTCLSYTIHYEYVCKEQDDSLYIEEHIEERMAFL    100
                     |||||.:....::|||...:.|..|..||||:.|:|.|:||.:|:|.|||
BPUM_0844___y     51 AKAKATLLDSSIQDDGAQHVQYLAHLTYVCKDVDESFYLEEQVEKREAFL    100

BSNT_01515___    101 YDHILISDQEIAKKPAGFHEGTSIIDYSEAEEEREAFGRAFQYDRLGAVQ    150
                     |:.:|:.|:.:.:|    .:....:|  |..:..|.|||||.|||..|||
BPUM_0844___y    101 YNDMLVKDRLMIEK----RQMEDQVD--ERFQTEEQFGRAFHYDRRAAVQ    144

BSNT_01515___    151 YAEKFWNKRNPAYKNFSDNCTNFISQCLHAGGAPMRGHPNRGSGWWMKQS    200
                     |||.:|||||||||||.|||||||||||.||.||.||:||||||||::..
BPUM_0844___y    145 YAETYWNKRNPAYKNFEDNCTNFISQCLKAGNAPTRGYPNRGSGWWVRPH    194

BSNT_01515___    201 SWSYSWTVAHSMKMYLSNSKAGLRAVRVKSAEELMPGDVICYDFEGDGRF    250
                     :||||||||||||.||:||||||||.::|.|:||..|||||||||||||:
BPUM_0844___y    195 TWSYSWTVAHSMKNYLANSKAGLRAQKLKDAQELQIGDVICYDFEGDGRY    244

BSNT_01515___    251 NHTTIVVAKDKGNMPLVNAQTYDSRMRYWSYEDSTAYTQSIRYAFFHIVD    300
                     |||||||..|||.|||||||||||||||||||||||||.:|||.||||:|
BPUM_0844___y    245 NHTTIVVDHDKGGMPLVNAQTYDSRMRYWSYEDSTAYTPAIRYMFFHILD    294

BSNT_01515___    301 DTTKE-    305
                     |..|: 
BPUM_0844___y    295 DAAKDS    300


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