Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03467 and BPUM_0840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence pep-align/BSNT_03467___sipS.1.24716.seq
# -bsequence pep-align/BPUM_0840___sipP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03467___sipS-BPUM_0840___sipP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03467___sipS-BPUM_0840___sipP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03467___sipS
# 2: BPUM_0840___sipP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 118/225 (52.4%)
# Similarity: 144/225 (64.0%)
# Gaps: 42/225 (18.7%)
# Score: 639.5
#
#
#=======================================
BSNT_03467___ 1 ---------------------------------------MKSENVSKKKS 11
..::...||..
BPUM_0840___s 1 MICWQNMFIFMVIQYKSKCWRKAGRNSFRPRGFQEELMTTNTKTQKKKSE 50
BSNT_03467___ 12 ILEWVKAIVIAVVLALLIRNFIFAPYVVDGESMEPTLHDRERVFVNMTVK 61
:..|:|||:||.:...:||||:||||:|.|.|||||||:.||||||.||.
BPUM_0840___s 51 VWGWLKAILIAFIAVFIIRNFLFAPYIVKGTSMEPTLHNTERVFVNKTVD 100
BSNT_03467___ 62 YIGEFDRGDIVVLNGDD--VHYVKRIIGLPGDTVEMKNDQLYINGKKVDE 109
|.|::.||.|:||:|:| .|||||:||||||.:||||||||:||:||.|
BPUM_0840___s 101 YFGDYKRGQIIVLDGEDRSTHYVKRLIGLPGDKIEMKNDQLYVNGQKVAE 150
BSNT_03467___ 110 PYLAANKKRAKQDGKPLTDDFGPVKVPDNKYFVMGDNRRNSMDSRNGLGL 159
||||:|||:|..||..||.||||:.||..|||||||||:|||||||||||
BPUM_0840___s 151 PYLASNKKKAAADGILLTPDFGPLTVPKGKYFVMGDNRQNSMDSRNGLGL 200
BSNT_03467___ 160 FTKKQIAGTSKFVFYPFNEMRKTN- 183
|||..|.||:.||||||.::|..|
BPUM_0840___s 201 FTKSDIQGTTSFVFYPFQDVRLLND 225
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