Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01449 and BPUM_0829

See DNA alignment / Visit BSNT_01449 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_01449___ygxA.1.24716.seq
#    -bsequence pep-align/BPUM_0829___ygxA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01449___ygxA-BPUM_0829___ygxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01449___ygxA-BPUM_0829___ygxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01449___ygxA
# 2: BPUM_0829___ygxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     230/294 (78.2%)
# Similarity:   263/294 (89.5%)
# Gaps:           2/294 ( 0.7%)
# Score: 1232.0
# 
#
#=======================================

BSNT_01449___      1 MENLLRPIYQERASHPNTLAVIMIERRNKTSSLTDNFDAALLVIVKDADE     50
                     ||||||||||||||||:|||||::|||:|.||.|||||||||||||:|:|
BPUM_0829___y      1 MENLLRPIYQERASHPDTLAVIIVERRHKVSSETDNFDAALLVIVKEAEE     50

BSNT_01449___     51 PVFIKHYEFDHQTASLHVVTDSQIQEWILLGTNRRIIDWIVNGRVLFDRN    100
                     |:||||||..||||||:||||.|::|||.|||||||||||:||:||||||
BPUM_0829___y     51 PLFIKHYESAHQTASLNVVTDEQLKEWITLGTNRRIIDWILNGKVLFDRN    100

BSNT_01449___    101 EYVVELIDRLNTFPFAERKLKIGLEYGKLIRRYVEGKAFFEANQFLDAYN    150
                     ||:..|||.|:||||:.||||||||||||||||:|||||||:||||||||
BPUM_0829___y    101 EYIFNLIDDLSTFPFSNRKLKIGLEYGKLIRRYIEGKAFFESNQFLDAYN    150

BSNT_01449___    151 AVVHALHHLARIEVIDRGFHPETTVWSQVRQMEPQVYKLYSELIESHESL    200
                     ::||||||||||||||:|||||.|||:|||.|||:|||||||||||||||
BPUM_0829___y    151 SIVHALHHLARIEVIDKGFHPEVTVWNQVRHMEPEVYKLYSELIESHESL    200

BSNT_01449___    201 EKRLELLFLANDFLIHSKAEIGSAHLFEVMKEKDIWQFGELLQHHDLKHF    250
                     .|||||||||||||||||||||:|||..||:::|||.|||||.|.|||:|
BPUM_0829___y    201 HKRLELLFLANDFLIHSKAEIGAAHLRHVMEQQDIWLFGELLAHPDLKYF    250

BSNT_01449___    251 TQDLGVMLDYLTEKGLINVCQIETKGQAVYHRGYSFKKGVDSDS    294
                     |.||.||:|:..|||::.|..||||||.:|||||..||.||:  
BPUM_0829___y    251 TPDLSVMIDFFVEKGIVQVEPIETKGQKIYHRGYFVKKDVDA--    292


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