Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01442 and BPUM_0818

See DNA alignment / Visit BSNT_01442 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_01442___ygaD.1.24716.seq
#    -bsequence pep-align/BPUM_0818.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01442___ygaD-BPUM_0818.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01442___ygaD-BPUM_0818.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01442___ygaD
# 2: BPUM_0818
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity:     451/580 (77.8%)
# Similarity:   533/580 (91.9%)
# Gaps:           0/580 ( 0.0%)
# Score: 2413.0
# 
#
#=======================================

BSNT_01442___      1 MGVMKRYMQFVKPYKKQIFVTVLIGIVKFSIPLALPLLLKYVVDDIIQGG     50
                     |||:||||.||.||||||.:|::||::||||||.||||||||:||:|||.
BPUM_0818          1 MGVIKRYMAFVTPYKKQIALTMVIGMIKFSIPLTLPLLLKYVIDDVIQGS     50

BSNT_01442___     51 GTASDKTTSLFTIMAIMFALFLILRPPVEYYRQYFAQWTASKVLYDIRAK    100
                     |:|.:||:||..||.||..|||::||||||||||:||||.||||:|||.|
BPUM_0818         51 GSADEKTSSLLMIMGIMLVLFLVMRPPVEYYRQYYAQWTGSKVLFDIREK    100

BSNT_01442___    101 LFDHIQKLSLRFYANTRTGEVISRVINDVEQTKDFVITGLMNIWLDMLTI    150
                     ||.||||||||:||||||||:||||||||||||:||||||||||||::|:
BPUM_0818        101 LFSHIQKLSLRYYANTRTGEIISRVINDVEQTKEFVITGLMNIWLDLMTV    150

BSNT_01442___    151 LIVISIMLTLDVKLTLISIVLFPLYGISVKYFYGRLRKLTRERSQALAQV    200
                     ||||:||.|||:|||::|:::||||..:||:|||||||||:|||||||:|
BPUM_0818        151 LIVIAIMCTLDIKLTIVSVIIFPLYAFAVKFFYGRLRKLTKERSQALAEV    200

BSNT_01442___    201 QGHLHERIQGMPVIRSFAIEDHEQAQFNEKNGHFLDKAIRHTNWNAKTFA    250
                     |||||||:||||||||||||::||..|:::|.:||:|||.||||||||||
BPUM_0818        201 QGHLHERVQGMPVIRSFAIEEYEQENFHDENKNFLNKAINHTNWNAKTFA    250

BSNT_01442___    251 VVNTITDLAPLIVIACAGYFVINGPLTVGTMVAFVGYIDRMYNPVRRLIN    300
                     |||||||:|||::||.|||.||||.|::|||:||||||||||||:|||||
BPUM_0818        251 VVNTITDIAPLLIIAFAGYTVINGSLSIGTMIAFVGYIDRMYNPIRRLIN    300

BSNT_01442___    301 SSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKADQIRGGVEFQNVSFQY    350
                     ||||||||:|||||:|||||||||:||:|||.:||.::|.|||::|||:|
BPUM_0818        301 SSTTLTQSVASMDRIFEFIDEPYEVTDRPNAKEADHLKGEVEFKHVSFRY    350

BSNT_01442___    351 EKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLL    400
                     |..:|.||.::||||.:|:||||||||||||||||||||||||||:|.|.
BPUM_0818        351 EHTQEEILRNISLKVEKGQTVALVGMSGGGKSTLVSLIPRFYDVTNGSLE    400

BSNT_01442___    401 IDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIE    450
                     |||.||::|:|||||||||||||||||||:||:||||:|.|:|:.|:|:.
BPUM_0818        401 IDGIDIKEYKARSLRNQVGMVLQDTFLFSDTIKENIAVGDPEASFEKIVS    450

BSNT_01442___    451 AAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLL    500
                     ||||||||:||||.||||:|:|||||||||||||||||||||||||||||
BPUM_0818        451 AAKAANAHDFIMSLPEGYDTKVGERGVKLSGGQKQRISIARVFLKNPPLL    500

BSNT_01442___    501 ILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVME    550
                     |||||||||||||||||||||.|||||||||:||||||||||||.|||||
BPUM_0818        501 ILDEATSALDLESEHYIQEAMQKLAKDRTTFIVAHRLSTITHADLIVVME    550

BSNT_01442___    551 NGTIIEIGTHDELMDYESQYKHLFTIQNLN    580
                     .|.|:|.|||:|||:.:|.|:||||||.||
BPUM_0818        551 QGEIVEKGTHEELMNRDSHYRHLFTIQTLN    580


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