Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04952 and BPUM_0807
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence pep-align/BSNT_04952___yvrI.1.24716.seq
# -bsequence pep-align/BPUM_0807___yvrI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04952___yvrI-BPUM_0807___yvrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04952___yvrI-BPUM_0807___yvrI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04952___yvrI
# 2: BPUM_0807___yvrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 108/215 (50.2%)
# Similarity: 154/215 (71.6%)
# Gaps: 18/215 ( 8.4%)
# Score: 560.0
#
#
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BSNT_04952___ 1 MDYQSLLRSKCKEIMKHPIVKHFLSNPQHYRLFKNVMESPNEKDAKSLDE 50
|||:.||::|..||:.||:::.|||||::.:|.:.|||.|||::||.||.
BPUM_0807___y 1 MDYRLLLKAKWNEIIDHPLIQQFLSNPKNQQLLRQVMEEPNEENAKKLDS 50
BSNT_04952___ 51 LFKQFYKEIRIVKYMNSMIRIFSIDFDKRVRKNQKRYPLTVDHPEAGD-R 99
.|||||::|||:||:::||||||:||||||:|.|:|:||.:|||:..: :
BPUM_0807___y 51 EFKQFYQKIRIIKYISTMIRIFSVDFDKRVKKKQQRFPLILDHPDTQEVK 100
BSNT_04952___ 100 LPSETGSDAFEEFLDRQDDLSQHVQDYQLYQAIQKLTDKQKSVLTKVYLH 149
.|.:| |.:|..|..|.||.:|:||.:||:|.|:||||||.|||.:|:.
BPUM_0807___y 101 DPVQT--DTYEAVLFNQQDLGEHLQDKRLYKAYQQLTDKQKMVLTHIYVE 148
BSNT_04952___ 150 GATMQEIADSLGESRQNISNIHKKGLENIRKQLA--AQKRGKSKLWTASL 197
|.||:||||.|||:||||||||||.|..::::.. .::|.|:..|
BPUM_0807___y 149 GQTMKEIADRLGETRQNISNIHKKALNKLKEETGGDVRERRKNDEW---- 194
BSNT_04952___ 198 NKKRNKKTRLMTLSI 212
||.:|.
BPUM_0807___y 195 ---RNGRTH------ 200
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