Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04954 and BPUM_0806

See DNA alignment / Visit BSNT_04954 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence pep-align/BSNT_04954.1.24716.seq
#    -bsequence pep-align/BPUM_0806.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04954-BPUM_0806.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04954-BPUM_0806.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04954
# 2: BPUM_0806
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 54
# Identity:      25/54 (46.3%)
# Similarity:    35/54 (64.8%)
# Gaps:           4/54 ( 7.4%)
# Score: 127.0
# 
#
#=======================================

BSNT_04954         1 MDQVFIEEVVKQIGNLGFPALIAMYLLTRFEKKFDQLIELMTELKDHAKK     50
                     |:..|.||.:||:|..||||::.:|||||||:|||:|.:|:..|....|.
BPUM_0806          1 METFFSEEWLKQLGQAGFPAILTVYLLTRFERKFDELSKLIQRLVAVQKN     50

BSNT_04954        50 ----     50
                         
BPUM_0806         51 DESD     54


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