Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04956 and BPUM_0805
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence pep-align/BSNT_04956___oxdC.1.24716.seq
# -bsequence pep-align/BPUM_0805___oxdC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04956___oxdC-BPUM_0805___oxdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04956___oxdC-BPUM_0805___oxdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04956___oxdC
# 2: BPUM_0805___oxdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity: 302/389 (77.6%)
# Similarity: 336/389 (86.4%)
# Gaps: 6/389 ( 1.5%)
# Score: 1633.0
#
#
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BSNT_04956___ 1 -MKKQNDIPQPIRGDKGATVKIPRNIERDRQNPDMLVPPETDHGTVSNMK 49
.:|||.:||||||:||||||||||:||||||||||.|||||||||.|||
BPUM_0805___o 1 MSEKQNGVPQPIRGEKGATVKIPRNLERDRQNPDMLTPPETDHGTVPNMK 50
BSNT_04956___ 50 FSFSDTHNRLEKGGYAREVTVRELPISENLASVNMRLKPGAIRELHWHKE 99
:||||||||||||||||||||||||||::|||||||||||||||||||||
BPUM_0805___o 51 YSFSDTHNRLEKGGYAREVTVRELPISKSLASVNMRLKPGAIRELHWHKE 100
BSNT_04956___ 100 AEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGA 149
|||||||||.||:|.||.:||:|.:||.|||||||||||||||||||.||
BPUM_0805___o 101 AEWAYMIYGEARITSVDAEGRNFTEDVTEGDLWYFPSGLPHSIQALEPGA 150
BSNT_04956___ 150 EFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEIANLPGKEK 199
||||||||||||||||||:||||||||:||:..|||:|||:...||.|||
BPUM_0805___o 151 EFLLVFDDGSFSENSTFQVTDWLAHTPEEVVLQNFGMTKEQFEKLPEKEK 200
BSNT_04956___ 200 YIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPIESEGGNVYIADST 249
|||:..:||||:.|.|:...||||..|.|.||:||||.|.||.|:|||||
BPUM_0805___o 201 YIFQKGIPGSLECDKVKTGQGEVPNSFKYELLKQEPITSSGGQVWIADST 250
BSNT_04956___ 250 NFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGH 299
|||.|||||||||.|:|||:|||||||||.||||:|||||||||||||||
BPUM_0805___o 251 NFKASKTIASALVKVDPGAIRELHWHPNTDEWQYFISGKARMTVFASDGH 300
BSNT_04956___ 300 ARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL 349
||||||||||||||||||||||||.|||||.||||||.|||||:||||||
BPUM_0805___o 301 ARTFNYQAGDVGYVPFAMGHYVENTGDEPLYFLEIFKSDHYADISLNQWL 350
BSNT_04956___ 350 AMLPETFVQAHLDLGKDFTDVLSKEKHPVV---KKKCSK 385
|:.|:..:..|||.|::|..:|..|||||: ||:.
BPUM_0805___o 351 AVTPKQLILDHLDQGEEFLKLLDTEKHPVIAAPKKED-- 387
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