Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01416 and BPUM_0794

See DNA alignment / Visit BSNT_01416 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:00
# Commandline: needle
#    -asequence pep-align/BSNT_01416___yfhF.1.24716.seq
#    -bsequence pep-align/BPUM_0794___yfhF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01416___yfhF-BPUM_0794___yfhF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01416___yfhF-BPUM_0794___yfhF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01416___yfhF
# 2: BPUM_0794___yfhF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     196/303 (64.7%)
# Similarity:   238/303 (78.5%)
# Gaps:           5/303 ( 1.7%)
# Score: 1058.0
# 
#
#=======================================

BSNT_01416___      1 MNIAMTGGTGFLGQHLTGVLTRQGHHVYILSRNAREAEQKNMTYVQWLSE     50
                     ||||:||||||:|||:|.||..:|||:|||:||.:|:||.::.|||||:|
BPUM_0794___y      1 MNIAITGGTGFIGQHVTKVLAAEGHHLYILTRNPKESEQNHLHYVQWLTE     50

BSNT_01416___     51 GAAPEQELPHIDVWINLAGKSIFGRWTEKTKQHILSSRINATREVQRLIQ    100
                     |||||.|||.|||||||||||||.|||:|.|:.||||||.:|:||:|:|:
BPUM_0794___y     51 GAAPEHELPAIDVWINLAGKSIFTRWTDKAKEGILSSRIQSTQEVRRIIE    100

BSNT_01416___    101 KQKEKPQTLIQASAVGIYGTSLEKTFTEDSATSDEDFLSHTAHLWEKEGQ    150
                     .|:.||..|||||||||||||....|||:|..:|.||||||:.|||.|||
BPUM_0794___y    101 AQESKPSVLIQASAVGIYGTSQTGDFTEESPPADTDFLSHTSKLWEAEGQ    150

BSNT_01416___    151 HIEAMGIRTVYARFGVMLGEKGALPLMILPYKFLAGGTIGTGRQWLSWIH    200
                     .|||:||||||.||||:|||||.||||.||||..||||||:|.||:||:|
BPUM_0794___y    151 KIEALGIRTVYTRFGVVLGEKGTLPLMTLPYKLFAGGTIGSGSQWVSWVH    200

BSNT_01416___    201 VEDAAQMIRYAVENAGISGPMNVTAPNPVDMKQFGKTIARVKHRPHWLPV    250
                     |||.|.:|.||:.|..||||:|||:||||.|||.|:|||...||||||.|
BPUM_0794___y    201 VEDVAHLIAYAIHNDDISGPLNVTSPNPVQMKQLGQTIASALHRPHWLKV    250

BSNT_01416___    251 PEFFLSKALGEMSLLIVKGQRALPKKAITSGFRFTYSDLEFALSQLIADR    300
                     |.|.:..||||||||:::||||||||.:.|.:.|.:.:|:.|:.....  
BPUM_0794___y    251 PSFVIRTALGEMSLLVLEGQRALPKKTLLSSYDFLHPELKEAILHSKE--    298

BSNT_01416___    301 KTV    303
                        
BPUM_0794___y    298 ---    298


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