Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01402 and BPUM_0787

See DNA alignment / Visit BSNT_01402 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence pep-align/BSNT_01402.1.24716.seq
#    -bsequence pep-align/BPUM_0787.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01402-BPUM_0787.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01402-BPUM_0787.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01402
# 2: BPUM_0787
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 860
# Identity:     511/860 (59.4%)
# Similarity:   674/860 (78.4%)
# Gaps:           8/860 ( 0.9%)
# Score: 2716.0
# 
#
#=======================================

BSNT_01402         1 MLIKKNALSILKIVFPIAVLLFVIYQSKKELTNLSFKRTLMVINGLERTD     50
                     |..||..::|||::|||.::|.:|:.:||||:.||.|:|..:|:.|.|.|
BPUM_0787          1 MWNKKTGMTILKMLFPIVIILVLIFVAKKELSGLSIKKTFYIIDSLNRMD     50

BSNT_01402        51 LFMLVLIGLLAVAAMSLYDYVLKYSLRLSITNGKVFRVSWIANSFNNVLG    100
                     ||:||.:||:||.:|||||::|:.||.:.|:..|..|:||||||||:|||
BPUM_0787         51 LFILVFLGLVAVLSMSLYDFILRKSLNMPISGWKTIRISWIANSFNSVLG    100

BSNT_01402       101 FGGLAGVGLRMMLYKEHTKDHKALVKGIAWLTSSMLLGLSVFSIFVAARV    150
                     ||||:|.|||.:||||:..|.|.|:||||.||||:|||||:||..:..||
BPUM_0787        101 FGGLSGAGLRTLLYKEYITDTKKLLKGIALLTSSVLLGLSIFSDLILVRV    150

BSNT_01402       151 LPVDEVIHEKPWLWAVVIGFALILPLSLAVSKIKDRKAGDEENADKVKNP    200
                     |||:.:|.::|||||.||.||.|:|:.:.::.|  ||:..|.....:|:|
BPUM_0787        151 LPVESIISQEPWLWAFVIIFACIVPIYIIMASI--RKSSIEGGESGLKHP    198

BSNT_01402       201 IFAYIGASVVEWLMAGIVIYFALFAMGIHADIRYVFGVFVIAAIGGMISL    250
                     |:||||||.:|||.||:|:|.|:.:||::.|:|.|.|:|.||:|||:||:
BPUM_0787        199 IYAYIGASFLEWLAAGLVMYMAVVSMGMNVDVRIVLGIFAIASIGGLISM    248

BSNT_01402       251 VPGGFGSFDLLFLLGMEQLGYHQEAIVTSIVLYRLAYSFIPFILGLFFAA    300
                     ||||||||||:|||.|:.:|:.:|.::|::||||..||..||||||..||
BPUM_0787        249 VPGGFGSFDLIFLLSMQYIGFDKEMVLTALVLYRFVYSIFPFILGLCLAA    298

BSNT_01402       301 GDLTENTMKRLETNPRIAPAIETTNVLLVVQRAVLVRILQGSLSLIVFVA    350
                     .|||..|::|||.|||:|||:||||||:|:.||:|:|:|.||||::.|.:
BPUM_0787        299 YDLTGTTLRRLEGNPRMAPAVETTNVLIVLHRALLIRLLYGSLSILTFGS    348

BSNT_01402       351 GLIVLASVSLPIDRLTVIPHIPRPALLLFNGLSLSSALILLILPIELYKR    400
                     ||:::|||.||:|||.||..|||..|..||||||...:||::|.||:|||
BPUM_0787        349 GLLIMASVVLPVDRLGVITSIPRFLLSGFNGLSLMFGIILMVLSIEVYKR    398

BSNT_01402       401 TKRSYTMAITALVGGFVFSFLKGLNISAIFVLPMIIVLLVLLKKQFVREQ    450
                     |||||.:.:.||.|||||:.|||.|:|.||:||:|:.:...|:.|||::|
BPUM_0787        399 TKRSYVLTMIALAGGFVFTLLKGFNLSLIFILPVIMAVFFSLRNQFVKQQ    448

BSNT_01402       451 ASYTLGQLIFAVALFTVALFNYNLIAGFIWDRMKKVLRHEYFVHSTSHIT    500
                     |.|:|.|.:.|.|.:.:.|||||:|..|||.::...|..:|.||:..|||
BPUM_0787        449 APYSLYQFVAAAAGYLLVLFNYNVIGNFIWTKIGHFLSKDYLVHNERHIT    498

BSNT_01402       501 HATIMAIIIVPLFFLIFTVVYHKRTKPIGEQADPERLAAFLNEKGGNALS    550
                     ..:::|:|.|||||.|..::::|:..||||:||.|:|..||.||||||||
BPUM_0787        499 MTSMIALIGVPLFFFISKLIFNKKAFPIGEKADEEKLKTFLEEKGGNALS    548

BSNT_01402       551 HLGFLGDKRFYFSSDGNALLLFGKIARRLVVLGDPSGQRESFPLVLEEFL    600
                     ||||||||:.:|||||.|:|.||:|.|.::|||||||::.|:||||||||
BPUM_0787        549 HLGFLGDKKLFFSSDGEAMLQFGRIGRCVIVLGDPSGRKASYPLVLEEFL    598

BSNT_01402       601 NEAHQKGFSVLFYQIEREDMALYHDFGYNFFKLGEEAYVDLNTFTLTGKK    650
                     .:..:.|:.|.|||:|||.||||||.|::||||||||.|||.||:|:|||
BPUM_0787        599 QQTEKAGYRVAFYQVEREGMALYHDLGFHFFKLGEEAMVDLETFSLSGKK    648

BSNT_01402       651 KAGLRAINNRFEREEYTFRVDHPPFSDAFLEELKQISDEWLGSKKEKGFS    700
                     |:.|||:.|:||||.|||.:..|||||.|:..||||||.|||.|||||||
BPUM_0787        649 KSNLRAVANKFEREGYTFDMLEPPFSDEFISTLKQISDSWLGKKKEKGFS    698

BSNT_01402       701 LGFFDPSYLQKAPIAYMKNAEGEIVAFANVMPMYQEGEISVDLMRYRGDA    750
                     ||:|...||||||||.:|:.:|||::|.::||||||||||:||||:..||
BPUM_0787        699 LGYFQEDYLQKAPIAILKDEQGEIISFVSLMPMYQEGEISIDLMRHMHDA    748

BSNT_01402       751 PNGIMDALFIRMFLWAKEEGCTSFNMGMAPLANVGTAFTSFWSERFAAVI    800
                     |||:||||||.:|.||||:|..|||||||||:||||...||.:||.|:||
BPUM_0787        749 PNGMMDALFIHLFQWAKEKGYKSFNMGMAPLSNVGTFHQSFLTERLASVI    798

BSNT_01402       801 FNNVRYMYSFSGLRAFKEKYKPEWRGKYLAYRKNRSLSVTMFLVTRLIG-    849
                     |||||:||||||||:||:|||||||||||||:||.||.|||.|||:||| 
BPUM_0787        799 FNNVRFMYSFSGLRSFKQKYKPEWRGKYLAYKKNTSLPVTMVLVTKLIGM    848

BSNT_01402       850 ---KSKKDSV    856
                        ::::.  
BPUM_0787        849 DPNRNRRP--    856


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01402 and BPUM_0787

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
