Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01393 and BPUM_0754

See DNA alignment / Visit BSNT_01393 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_01393___yfiR.1.24716.seq
#    -bsequence pep-align/BPUM_0754.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01393___yfiR-BPUM_0754.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01393___yfiR-BPUM_0754.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01393___yfiR
# 2: BPUM_0754
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity:      53/213 (24.9%)
# Similarity:   103/213 (48.4%)
# Gaps:          27/213 (12.7%)
# Score: 176.5
# 
#
#=======================================

BSNT_01393___      1 MSPKVTKEHKDKRQTKILEAAKTVFKRKGFELTTMKDVVEESGFSRGGVY     50
                          .|:.|...|.::||.|.|:|..|||..|:|.::|..|..|:..||
BPUM_0754          1 -----MKKVKLMNQKRVLEVAATLFLEKGFAYTSMDELVRVSKVSKSNVY     45

BSNT_01393___     51 LYFSSTEEMFRRIIETGLDEGLRKLDK--SAEHQSVWSAISIYLDELSEG     98
                     .:||:.||:...:::..:|.....:|.  |.....|...|.::|.:||:|
BPUM_0754         46 YHFSNKEELLEGVVDYWIDMYQSAIDDVLSQNQFLVEERIQLFLKQLSQG     95

BSNT_01393___     99 L--RDVADTLAPVQFEYLVTAWRNEERRQYLEKRYDLFV----ERFSNLL    142
                     :  ||...: .|....|:    ::..:...::::..||.    ::.:.||
BPUM_0754         96 VQSRDYKGS-CPFITLYI----QSPTQATQIKEKIGLFFTGLQKKITLLL    140

BSNT_01393___    143 QKGIDQGEFQPLQPLATIAKFFLNMNDGIIQNALYFDEEKADVSGLAESA    192
                     ::|:|.|||:....:..:|..|:...:|    ||:..|...|.:.:.::|
BPUM_0754        141 KQGVDSGEFRKTIHIDEVASLFITNLEG----ALFISETLKDATVITKTA    186

BSNT_01393___    193 KLYLKTVLQADEK    205
                     . ::..:|:    
BPUM_0754        187 D-HMFNLLR----    194


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