Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01338 and BPUM_0753
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence pep-align/BSNT_01338___yfjO.1.24716.seq
# -bsequence pep-align/BPUM_0753___trmA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01338___yfjO-BPUM_0753___trmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01338___yfjO-BPUM_0753___trmA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01338___yfjO
# 2: BPUM_0753___trmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity: 363/466 (77.9%)
# Similarity: 409/466 (87.8%)
# Gaps: 5/466 ( 1.1%)
# Score: 1957.0
#
#
#=======================================
BSNT_01338___ 1 MNQQKKQAPVELKVGQTFPLTIKRLGINGEGVGYFKKKVVFVPGALPGEE 50
.::.|....|:.||.||||||||||||||||||||:||||||||||||
BPUM_0753___t 1 --MKENQQGALLQKGQQFPLTIKRLGINGEGVGYFKKQVVFVPGALPGEE 48
BSNT_01338___ 51 VVVQATKVQPKFSEGRIKKIRKASEHRVAPPCPVYEQCGGCQLQHLAYSQ 100
|||:||.||.|::||.::|:||.|||||.|||||||:|||||||||||.|
BPUM_0753___t 49 VVVEATNVQAKYAEGTVRKVRKRSEHRVKPPCPVYEECGGCQLQHLAYEQ 98
BSNT_01338___ 101 QLREKRDIVIQSLERHTKFKVENMEIKETIGMDNPWNYRNKSQFQIGRSQ 150
||||||||||||:|||||..||.::|:.||||::||:||||||||:|||.
BPUM_0753___t 99 QLREKRDIVIQSMERHTKLSVEKLDIRPTIGMEDPWHYRNKSQFQVGRSH 148
BSNT_01338___ 151 SGSIIAGLYGLDSHDIVPIKDCIVQHPATNKTTGIVRRILEDFNVSVYNE 200
||.||||||||:||.:||||:||||||.||||||:||:|||.|.||||||
BPUM_0753___t 149 SGDIIAGLYGLNSHKLVPIKECIVQHPKTNKTTGVVRKILEKFGVSVYNE 198
BSNT_01338___ 201 RKRKGDVRTIVTRVGFETGEVQVVLVTAKETLPHKEEIVKAIQKRLPEVK 250
|.||||||:||.|||||||||||||||:|...|.|:||..|||||||||.
BPUM_0753___t 199 RTRKGDVRSIVVRVGFETGEVQVVLVTSKPEFPKKKEIADAIQKRLPEVT 248
BSNT_01338___ 251 SIIQNVNGAKTSVIFGEKTKQLAGKTVIQEVLGDVSFELSARAFFQLNPE 300
||:.|:||.|||||||.||..|||..||||.||||||||||||||||||:
BPUM_0753___t 249 SIMHNINGEKTSVIFGHKTSHLAGNMVIQEFLGDVSFELSARAFFQLNPK 298
BSNT_01338___ 301 QTVKLYDEVKKAAQLTGKEKVVDAYCGVGTIGMWVADGAKEVRGMDVIKE 350
||:|||||.||||:||||||||||||||||||||::||||||||||||||
BPUM_0753___t 299 QTLKLYDEAKKAAKLTGKEKVVDAYCGVGTIGMWLSDGAKEVRGMDVIKE 348
BSNT_01338___ 351 SIDDAKKNAKKHGMANATYVTGTAEHWLPKWTKEGFRPDVVIVDPPRTGC 400
||||||||||||||.||||||||||||||||.||||||||::||||||||
BPUM_0753___t 349 SIDDAKKNAKKHGMKNATYVTGTAEHWLPKWVKEGFRPDVIVVDPPRTGC 398
BSNT_01338___ 401 DSTFLDTIKKVKPKRFVYVSCNPSTLAKDLQTLSKDYRVDYIQPVDMFPQ 450
:.|||||:|:|||||.||||||||||||||:.:||||:::|:|||||||.
BPUM_0753___t 399 ERTFLDTVKQVKPKRLVYVSCNPSTLAKDLEYISKDYKIEYMQPVDMFPH 448
BSNT_01338___ 451 TAHVEAVARLVLKSSN 466
|:|||.|..||.|
BPUM_0753___t 449 TSHVETVVSLVKK--- 461
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