Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05998 and BPUM_0749

See DNA alignment / Visit BSNT_05998 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence pep-align/BSNT_05998___yxiI.1.24716.seq
#    -bsequence pep-align/BPUM_0749.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05998___yxiI-BPUM_0749.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05998___yxiI-BPUM_0749.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05998___yxiI
# 2: BPUM_0749
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 169
# Identity:      69/169 (40.8%)
# Similarity:    93/169 (55.0%)
# Gaps:          13/169 ( 7.7%)
# Score: 331.0
# 
#
#=======================================

BSNT_05998___      1 MMNWRALSQTKQDRIWSEVNKLIKWKPG-SRCHHIIPPDPYRVFDISSAM     49
                     |.||..||..::...|..:.:..|:.|. ||......|.|:..:|||   
BPUM_0749          1 MKNWIPLSHQERKLAWETLYRDFKFHPSISRFPSFRVPSPFITYDIS---     47

BSNT_05998___     50 SSKAGHNDVSGVLSD--LETSILKAFQLGTGKNDVMYALDWQHDGYTFSP     97
                        |...|.|.:.:|  ||...|..||.....::.|.||||||:.|..:|
BPUM_0749         48 ---AYFEDPSLLHADEGLEKKALLVFQELIRTDEYMLALDWQHECYWITP     94

BSNT_05998___     98 HQAMPKDEFGEWPVPVFPNGDYYFFFHQDFSWGLLGDPWKLTITVFGEEL    147
                     :.:..|||||||.|||.||||||||..::..|||||.||:.:||:|||.|
BPUM_0749         95 YGSFEKDEFGEWTVPVLPNGDYYFFLSKEMHWGLLGHPWEQSITIFGEGL    144

BSNT_05998___    148 LEAIDHDPPILFQNR----    162
                     :::.....|||||.:    
BPUM_0749        145 IDSFSRHHPILFQRKIREG    163


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