Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01332 and BPUM_0748

See DNA alignment / Visit BSNT_01332 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence pep-align/BSNT_01332___yfjS.1.24716.seq
#    -bsequence pep-align/BPUM_0748___yfjS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01332___yfjS-BPUM_0748___yfjS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01332___yfjS-BPUM_0748___yfjS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01332___yfjS
# 2: BPUM_0748___yfjS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     197/263 (74.9%)
# Similarity:   230/263 (87.5%)
# Gaps:           0/263 ( 0.0%)
# Score: 1084.0
# 
#
#=======================================

BSNT_01332___      1 MKWMCSICCAAVLLAGGAAQAEAVPNEPINWGFKRSVNHQPPDAGKQLNS     50
                     ||....||..|:.::...::||||.|:|::|||.:|..|||.||||:||:
BPUM_0748___y      1 MKKTMLICLCALFVSMPLSEAEAVSNQPVHWGFAKSKEHQPADAGKELNA     50

BSNT_01332___     51 LIEKYDAFYLGNTKEKTIYLTFDNGYENGYTPKVLDVLKKHRVTGTFFVT    100
                     |::|||||||||||:|.||.|||||||||||||:|||||||:|.||||||
BPUM_0748___y     51 LLKKYDAFYLGNTKKKEIYFTFDNGYENGYTPKILDVLKKHQVPGTFFVT    100

BSNT_01332___    101 GHFVKDQPQLIKRMSDEGHIIGNHSFHHPDLTTKTADQIQDELDSVNEEV    150
                     ||||||||:|:|||::|||||||||:||||||||:..:|::||..|:|.|
BPUM_0748___y    101 GHFVKDQPELVKRMAEEGHIIGNHSYHHPDLTTKSTKEIKEELQRVDEAV    150

BSNT_01332___    151 YKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQTVFWSVAFVDWKINNQK    200
                     |||||||||||||||||||||.||||||.|||||||||||||||.|::||
BPUM_0748___y    151 YKITGKQDNLYLRPPRGVFSERVLKETKELGYQTVFWSVAFVDWHIHHQK    200

BSNT_01332___    201 GKKYAYDHMIKQAHPGAIYLLHTVSRDNAEALDDAITDLKKQGYTFKSID    250
                     ||:||||.|:|||||||||||||||||||||||||||.||||||:|||:|
BPUM_0748___y    201 GKQYAYDQMMKQAHPGAIYLLHTVSRDNAEALDDAITALKKQGYSFKSLD    250

BSNT_01332___    251 DLMFEKEMKMPSL    263
                     |||.||...:|.|
BPUM_0748___y    251 DLMLEKVWHLPQL    263


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