Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01165 and BPUM_0743

See DNA alignment / Visit BSNT_01165 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence pep-align/BSNT_01165___yeeI.1.24716.seq
#    -bsequence pep-align/BPUM_0743___yeeI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01165___yeeI-BPUM_0743___yeeI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01165___yeeI-BPUM_0743___yeeI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01165___yeeI
# 2: BPUM_0743___yeeI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     209/239 (87.4%)
# Similarity:   229/239 (95.8%)
# Gaps:           0/239 ( 0.0%)
# Score: 1088.0
# 
#
#=======================================

BSNT_01165___      1 MGRKWNNIKEKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALKVV     50
                     |||||||||||||||||:|||||||||||||||||||||:|||||||:.|
BPUM_0743___y      1 MGRKWNNIKEKKASKDASTSRIYAKFGREIYVAAKQGEPNPESNQALRFV     50

BSNT_01165___     51 LERAKTYSVPKNIIERAIEKAKGGAEENYDELRYEGFGPNGSMIIVDALT    100
                     |||||||||||:|::|||||||||||||:||||||||||||||:||||||
BPUM_0743___y     51 LERAKTYSVPKHIVDRAIEKAKGGAEENFDELRYEGFGPNGSMVIVDALT    100

BSNT_01165___    101 NNVNRTAPEVRAAFGKNGGNMGVSGSVAYMFDATAVIGVEGKTADEALEI    150
                     |||||||.:|||||||||||||||||||||||.|||||||||:.:|.||:
BPUM_0743___y    101 NNVNRTASDVRAAFGKNGGNMGVSGSVAYMFDQTAVIGVEGKSEEETLEL    150

BSNT_01165___    151 LMEADVDVRDILEEDDSVIVYAEPDQFHAVQEAFKNAGVEEFTVAELTML    200
                     |||||||||||:|||::|||||||||||.||||||.||||||||||:|||
BPUM_0743___y    151 LMEADVDVRDIMEEDETVIVYAEPDQFHQVQEAFKQAGVEEFTVAEITML    200

BSNT_01165___    201 AQSEVTLPDDAKEQFEKLIDALEDLEDVQQVYHNVDLGE    239
                     .|:||||.|::|||||||||.||:|||||||||||||||
BPUM_0743___y    201 PQNEVTLDDESKEQFEKLIDVLEELEDVQQVYHNVDLGE    239


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.