Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01165 and BPUM_0743
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence dna-align/BSNT_01165___yeeI.1.24716.seq
# -bsequence dna-align/BPUM_0743___yeeI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01165___yeeI-BPUM_0743___yeeI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01165___yeeI-BPUM_0743___yeeI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01165___yeeI
# 2: BPUM_0743___yeeI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 723
# Identity: 557/723 (77.0%)
# Similarity: 557/723 (77.0%)
# Gaps: 6/723 ( 0.8%)
# Score: 2123.0
#
#
#=======================================
BSNT_01165___ 1 ATGGGCCGTAAGTGGAACAATATTAAAGAGAAGAAGGCGTCTAAGGACGC 50
|||||.||||||||||||||.||||||||.|||||.||.||.|||||.||
BPUM_0743___y 1 ATGGGTCGTAAGTGGAACAACATTAAAGAAAAGAAAGCATCAAAGGATGC 50
BSNT_01165___ 51 AAATACGAGTCGGATTTATGCGAAGTTTGGCCGTGAGATTTATGTGGCGG 100
.|.|||.|||||.|||||.||.||.||.||.|||||.||.||||||||.|
BPUM_0743___y 51 CAGTACAAGTCGTATTTACGCAAAATTCGGGCGTGAAATCTATGTGGCTG 100
BSNT_01165___ 101 CGAAACAGGGCGAGCCTGATCCGGAATCCAACCAGGCGCTGAAGGTTGTG 150
|.|||||.||.|||||..|.||.|||||.|||||.||.||.....||||.
BPUM_0743___y 101 CCAAACAAGGTGAGCCAAACCCAGAATCAAACCAAGCACTTCGTTTTGTC 150
BSNT_01165___ 151 CTTGAGCGTGCGAAGACTTACAGCGTGCCGAAAAACATCATTGAACGTGC 200
||.||.|||||.||.||.||.||.||.||.|||.||||..|.||.|||||
BPUM_0743___y 151 CTAGAACGTGCAAAAACATATAGTGTCCCAAAACACATTGTAGACCGTGC 200
BSNT_01165___ 201 GATCGAGAAGGCGAAGGGCGGAGCGGAAGAGAATTACGATGAGCTTCGTT 250
.||.||.||.||.||.||.||.|||||||||||||.|||||||||.||.|
BPUM_0743___y 201 CATTGAAAAAGCAAAAGGTGGTGCGGAAGAGAATTTCGATGAGCTGCGCT 250
BSNT_01165___ 251 ATGAGGGCTTCGGGCCGAACGGATCAATGATTATCGTTGATGCGCTGACG 300
|.||.||.||.||.||.||||||||||||.|.|||||||||||.||.||.
BPUM_0743___y 251 ACGAAGGATTTGGTCCAAACGGATCAATGGTCATCGTTGATGCCCTTACC 300
BSNT_01165___ 301 AATAATGTAAACCGTACGGCGCCGGAAGTGCGTGCGGCGTTCGGGAAAAA 350
|||||.||.||||||||.||..|.||.||.||||||||.|||||||||||
BPUM_0743___y 301 AATAACGTGAACCGTACAGCATCAGATGTTCGTGCGGCATTCGGGAAAAA 350
BSNT_01165___ 351 CGGCGGAAACATGGGTGTGAGCGGATCTGTTGCTTACATGTTTGACGCGA 400
|||.|||||||||||.||.|||||.||||||||.||||||||||||...|
BPUM_0743___y 351 CGGTGGAAACATGGGCGTAAGCGGCTCTGTTGCCTACATGTTTGACCAAA 400
BSNT_01165___ 401 CGGCTGTAATCGGTGTGGAAGGCAAAACGGCTGACGAAGCGCTTGAAATC 450
|.|||||.||||||||.|||||.||||..|..||.|||.|||||||..|.
BPUM_0743___y 401 CAGCTGTCATCGGTGTCGAAGGAAAAAGTGAAGAAGAAACGCTTGAGCTT 450
BSNT_01165___ 451 CTGATGGAAGCGGATGTTGATGTACGTGACATTTTAGAAGAGGATGACAG 500
.|.||||||||.||.|||||||||||||||||..|.|||||.|||||.|.
BPUM_0743___y 451 TTAATGGAAGCAGACGTTGATGTACGTGACATCATGGAAGAAGATGAAAC 500
BSNT_01165___ 501 CGTGATCGTATATGCTGAGCCTGATCAATTCCATGCGGTGCAAGAGGCGT 550
.|||||.|||||.|||||.||.||||||||||||...||.|||||.||.|
BPUM_0743___y 501 AGTGATTGTATACGCTGAACCAGATCAATTCCATCAAGTACAAGAAGCAT 550
BSNT_01165___ 551 TTAAAAACGCGGGCGTTGAGGAATTTACAGTAGCGGAGCTGACAATGCTT 600
|.|||.|.||.|||||.||.||||||||.||.||.||..|.|||||||||
BPUM_0743___y 551 TCAAACAAGCCGGCGTAGAAGAATTTACTGTCGCTGAAATCACAATGCTT 600
BSNT_01165___ 601 GCGCAAAGTGAAGTAACGCTTCCGGATGATG---CAAAGGAACAGTTTGA 647
.|.||||.||||||.||..| .||||||| |.||.|||||.||.||
BPUM_0743___y 601 CCTCAAAATGAAGTGACATT---AGATGATGAATCTAAAGAACAATTCGA 647
BSNT_01165___ 648 AAAATTGATTGATGCATTAGAAGATTTGGAAGATGTTCAGCAGGTATATC 697
.|||.|.||.||||.|||||||||..|.|||||.||.||||||||.||||
BPUM_0743___y 648 GAAACTAATCGATGTATTAGAAGAGCTTGAAGACGTGCAGCAGGTTTATC 697
BSNT_01165___ 698 ATAACGTTGATTTAGGTGAGTAA 720
||||.||.||||||||.||.|||
BPUM_0743___y 698 ATAATGTGGATTTAGGGGAATAA 720
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