Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01327 and BPUM_0742

See DNA alignment / Visit BSNT_01327 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence pep-align/BSNT_01327___yfkD.1.24716.seq
#    -bsequence pep-align/BPUM_0742___yfkD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01327___yfkD-BPUM_0742___yfkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01327___yfkD-BPUM_0742___yfkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01327___yfkD
# 2: BPUM_0742___yfkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     196/264 (74.2%)
# Similarity:   219/264 (83.0%)
# Gaps:           4/264 ( 1.5%)
# Score: 1007.0
# 
#
#=======================================

BSNT_01327___      1 MMKKLFHSTLIVLLFFSFFGVQPIHAKKQFKVPNSVASISKENTYPNASQ     50
                      |||:.....:|||..||....|..|.|.||||:||||||||||||||||
BPUM_0742___y      1 -MKKMPRIMFVVLLSLSFLYSFPAEAAKPFKVPSSVASISKENTYPNASQ     49

BSNT_01327___     51 DQPMLQPSKLAKELLDHSEVKIENPHLIKMLNESNISGTPLAVGYRATIF    100
                     |||:||||:|..||...::|.|||.|||||||||:|||||||||||||||
BPUM_0742___y     50 DQPLLQPSELTAELFKTTDVPIENTHLIKMLNESSISGTPLAVGYRATIF     99

BSNT_01327___    101 LGKWALGYESNETVANWEYKKINTNRADNRGGKETAEMHYAQEQQYRVKG    150
                     ||:|||.|:||||||||||||:|||..|||||.:||...|.|:||.:|.|
BPUM_0742___y    100 LGRWALSYDSNETVANWEYKKVNTNHIDNRGGNKTAIGKYVQKQQVKVSG    149

BSNT_01327___    151 GLTAKVPNAEDVKSMMMQKAMKKTNLPLAFETVIGAGTKRDQIYKVAPKK    200
                     ||||||||.||||::|||||::||.|||||:|||||||||||.|.|:|||
BPUM_0742___y    150 GLTAKVPNPEDVKTLMMQKAIQKTKLPLAFDTVIGAGTKRDQSYHVSPKK    199

BSNT_01327___    201 IGYLHAYAPAVNEKGKVTYGEVYLVLKGNKRKLVVKNVTSQGIGAWIPVQ    250
                     ...|||||||:|||||||||||||||||||||||||||||||||||||||
BPUM_0742___y    200 AASLHAYAPAINEKGKVTYGEVYLVLKGNKRKLVVKNVTSQGIGAWIPVQ    249

BSNT_01327___    251 DHVTFGFQLSSLPR    264
                     ||:|||||..:   
BPUM_0742___y    250 DHLTFGFQGMN---    260


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.