Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01324 and BPUM_0739
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence pep-align/BSNT_01324___yfkF.1.24716.seq
# -bsequence pep-align/BPUM_0739___yfkF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01324___yfkF-BPUM_0739___yfkF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01324___yfkF-BPUM_0739___yfkF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01324___yfkF
# 2: BPUM_0739___yfkF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity: 255/398 (64.1%)
# Similarity: 308/398 (77.4%)
# Gaps: 12/398 ( 3.0%)
# Score: 1332.0
#
#
#=======================================
BSNT_01324___ 1 MSRFHFFILVLLVSISGFSQGMLLPVISIIFETNGESAAINGLHATGLYI 50
|||.||.||:||||:||||||.||||||||||..|.|..:|||||||||:
BPUM_0739___y 1 MSRIHFMILILLVSVSGFSQGALLPVISIIFEHAGTSPTLNGLHATGLYL 50
BSNT_01324___ 51 GVLLASPFMEAPLRKLGFKPLIVMGGSIVILSLFGFIWLQSVWVWFLLRL 100
||||||||||||||:.|||||||:||:.|.||||.|::.:|..|||.|||
BPUM_0739___y 51 GVLLASPFMEAPLRRFGFKPLIVIGGAAVFLSLFSFVFFESYVVWFFLRL 100
BSNT_01324___ 101 FIGIGDHMLHFSTQTWVTSMSSKQNRGRNLSIYGLSFGLGFAAGPFMVPL 150
.|||||||||||||||||..||.:|||||:|:||||||||||||||:.||
BPUM_0739___y 101 MIGIGDHMLHFSTQTWVTYASSSRNRGRNISLYGLSFGLGFAAGPFLTPL 150
BSNT_01324___ 151 VKLSPSLPFIVSGCISLFAWLFVFFLQNAYPETSPHET-KSDNSFRRFYQ 199
::::|||||||||.:||..||.||.|:|.||:|...:| :..||.:||.:
BPUM_0739___y 151 IEINPSLPFIVSGAVSLCIWLLVFVLKNTYPDTGEVQTSEQTNSLKRFKK 200
BSNT_01324___ 200 AMLFGWVAFMPTFGYGFLETALNGSFPVYALRLGISVDAVAIILPAFAIG 249
|..|||||||..|.||||||.||.:|||||||.|::|||||.||||||||
BPUM_0739___y 201 AFQFGWVAFMMPFCYGFLETTLNSNFPVYALRSGVTVDAVAFILPAFAIG 250
BSNT_01324___ 250 SIIFQFPLGILSDKYGRRNVLLVILLTGALCFFIAGVF-PSPYVIGGCFF 298
||:||.|||:|||::|||.::|.:.|.|:..|.:||:| .|...:..|||
BPUM_0739___y 251 SIVFQLPLGMLSDRFGRRRIILCVTLVGSFFFLLAGIFIQSVLAVAICFF 300
BSNT_01324___ 299 IAGMAVGSTFTLGISYMTDLLPPHLLPAGNLLCGITFSLGSILGPVAGGW 348
||||||||||:|||||||||||.||||||||:||:.||.|||||||.||.
BPUM_0739___y 301 IAGMAVGSTFSLGISYMTDLLPKHLLPAGNLMCGMAFSAGSILGPVLGGI 350
BSNT_01324___ 349 YMQTFESANLFYFITLTLSAVWLALVLGKPKSWSPAETYSSSS----- 391
::||||..||.|.:::.:..|:..:..|: .|....:|:
BPUM_0739___y 351 FVQTFEGMNLLYLVSIVILFVFFCVRFGR-----TAAVLENSNEAISK 393
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