Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01303 and BPUM_0730

See DNA alignment / Visit BSNT_01303 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence pep-align/BSNT_01303___treR.1.24716.seq
#    -bsequence pep-align/BPUM_0730___treR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01303___treR-BPUM_0730___treR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01303___treR-BPUM_0730___treR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01303___treR
# 2: BPUM_0730___treR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     175/242 (72.3%)
# Similarity:   203/242 (83.9%)
# Gaps:           4/242 ( 1.7%)
# Score: 917.0
# 
#
#=======================================

BSNT_01303___      1 MKVNKFITIYKDIAQQIEGGRWKAEEILPSEHELTAQYGTSRETVRKALH     50
                     ||.|||..||..:|::||.|.|:.:.||||||||:..|.||||||||||:
BPUM_0730___t      1 MKENKFRVIYDQLAKRIEQGEWQDKGILPSEHELSLMYDTSRETVRKALN     50

BSNT_01303___     51 MLAQNGYIQKIRGKGSVVLNREKMQFPVSGLVSFKELAQTLGKETKTTVH    100
                     :|.||||||||||||||:|||||||||||||||||||:||||::|.||||
BPUM_0730___t     51 ILVQNGYIQKIRGKGSVLLNREKMQFPVSGLVSFKELSQTLGRKTVTTVH    100

BSNT_01303___    101 KFGLEPPSELIQKQLRANLDDDIWEVIRSRKIDGEHVILDKDYFFRKHVP    150
                     :|||..|.:.||.||:.:..:|:|||||||.|.||.||||||||.:|||.
BPUM_0730___t    101 EFGLIKPDQYIQSQLKISGQEDVWEVIRSRNISGEEVILDKDYFLQKHVS    150

BSNT_01303___    151 HLTKEICENSIYEYIEGELGLSISYAQKEIVAEPCTDEDRELLDLRGYDH    200
                     .|:|:|||.|||||||||||:||||||||.|.||||:||.:.|||.|:||
BPUM_0730___t    151 VLSKDICEGSIYEYIEGELGVSISYAQKEFVVEPCTEEDAKYLDLNGFDH    200

BSNT_01303___    201 MVVVRNYVFLEDTSLFQYTESRHRLDKFRFVDFARRGK----    238
                     :|||:|||||||||||||||||||||:|||||||||.|    
BPUM_0730___t    201 VVVVKNYVFLEDTSLFQYTESRHRLDRFRFVDFARREKVDRA    242


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