Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01294 and BPUM_0727

See DNA alignment / Visit BSNT_01294 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:52
# Commandline: needle
#    -asequence pep-align/BSNT_01294.1.24716.seq
#    -bsequence pep-align/BPUM_0727.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01294-BPUM_0727.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01294-BPUM_0727.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01294
# 2: BPUM_0727
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:      68/131 (51.9%)
# Similarity:    95/131 (72.5%)
# Gaps:           3/131 ( 2.3%)
# Score: 358.0
# 
#
#=======================================

BSNT_01294         1 MMDFSHIVSEDKIKRAIKDGDFQNLPGMGKPLPKDDAAHLPESLRMGYRI     50
                      |||:..:||::||:|:.:|.|:.|.|.|||||||||||:||.||||||:
BPUM_0727          1 -MDFAQRLSEERIKKAMDNGAFEGLSGFGKPLPKDDAAHIPEELRMGYRM     49

BSNT_01294        51 LKNAGMAEDEGALKKELMTIDHLIEKCYDEKEREQLIRKKSEKQLLLDKL    100
                     :||||.|.:|.||||||||:..|:....|.:||::|.....|||..||:|
BPUM_0727         50 MKNAGFAGEETALKKELMTVKELLHSSIDGEERKKLSLICEEKQKRLDEL     99

BSNT_01294       101 VDKKGMFSKPASAFYKNKVYDRLGRNRPSSS    131
                     ..|:..|::|||:||||:||::|..::..  
BPUM_0727        100 TSKRQTFARPASSFYKNRVYEKLTEHKKR--    128


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