Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01281 and BPUM_0715

See DNA alignment / Visit BSNT_01281 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:52
# Commandline: needle
#    -asequence pep-align/BSNT_01281___yflL.1.24716.seq
#    -bsequence pep-align/BPUM_0715.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01281___yflL-BPUM_0715.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01281___yflL-BPUM_0715.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01281___yflL
# 2: BPUM_0715
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 103
# Identity:      41/103 (39.8%)
# Similarity:    57/103 (55.3%)
# Gaps:          13/103 (12.6%)
# Score: 215.0
# 
#
#=======================================

BSNT_01281___      1 ------------MLQYRIIVNGRVQGVGFRYFVQMEADKRKLAGWVKNRD     38
                                 ::.|..|:.|||||||||||||.||..|.:.|||:|.|
BPUM_0715          1 MLWYDEKKGEMTLIHYHAIITGRVQGVGFRYFVQGEAVNRGMKGWVRNTD     50

BSNT_01281___     39 DGRVEILAEGPENALQSFVEAVKNGSPFSKVTDISVTESRSLEGHHRFSI     88
                     :|.||:..||.:..:..|::.|:.|||||||||:.:.:......:..|.|
BPUM_0715         51 EGHVELKVEGEQQEVLDFLKTVRKGSPFSKVTDMQMEQLPEFAHYQDFRI    100

BSNT_01281___     89 VYS     91
                     .. 
BPUM_0715        101 KG-    102


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.