Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01276 and BPUM_0709
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence pep-align/BSNT_01276.1.24716.seq
# -bsequence pep-align/BPUM_0709___yflP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01276-BPUM_0709___yflP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01276-BPUM_0709___yflP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01276
# 2: BPUM_0709___yflP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity: 151/327 (46.2%)
# Similarity: 229/327 (70.0%)
# Gaps: 9/327 ( 2.8%)
# Score: 816.0
#
#
#=======================================
BSNT_01276 1 MKKSIILLILLL---IFMQGDIRQAAAPRLPDGPIEIVVPAEPSGGWDVT 47
|||:|.|::::: :.:..:.::.....|...|:.|||...|.||:|.|
BPUM_0709___y 1 MKKAICLIVIIICLCLALTFNEKKGGDSFLEHSPLYIVVSGVPDGGFDQT 50
BSNT_01276 48 AQAIQSVLRQKQIVKGDVHIVYKSGGGGEKGWKYVNKSSKQTISMTSSLI 97
||.::|||.::::||..|:|:|:.||..:|||.|:.:.....||:.|||:
BPUM_0709___y 51 AQVMKSVLEKEKLVKQPVNILYQRGGTVDKGWTYMLERETNYISLNSSLL 100
BSNT_01276 98 LSNDLLGQSKLKMSDFTPLAILSKEWQTVALPKGSALTNGKDVLNEINMH 147
||.:|||.|.:.|:|.||||||::|||.||:|..|..:|||::||.:...
BPUM_0709___y 101 LSRNLLGSSNMTMNDVTPLAILAEEWQVVAVPVDSPFSNGKELLNTLKKK 150
BSNT_01276 148 PGKVRIGFAPGFGNDDQLSFVRAADMYGIDPFDIQFSQYDSSEQLIQALI 197
|..::|||||.||||||:||.|||:|.||||:.|||.::||::.|.:|||
BPUM_0709___y 151 PDSLKIGFAPDFGNDDQISFARAAEMAGIDPYRIQFLKFDSADDLFRALI 200
BSNT_01276 198 RHEIEAASMTLSEAK-PYERNGDITLAAVTSDKRLPGFPNVPTWKEQGIP 246
.||::||:.|::|.: .||:. .:.|.|.|::|||.||.:||||||||||
BPUM_0709___y 201 DHEVDAATTTITEVRHDYEKK-RLKLVATTTNKRLAGFEDVPTWKEQGIP 249
BSNT_01276 247 FVFSHWRGILGPKNMSEEEISYWDQALKKVTSSPEWKRKINEQDWESFYL 296
.:||||||::|||.||:::|..|||.|:|:|.:..||:::.::.|.|.|:
BPUM_0709___y 250 LIFSHWRGVMGPKQMSQKDIREWDQLLQKMTQTKSWKKQLKQKGWTSRYM 299
BSNT_01276 297 NSRETKRFLEEQSAFYQSIMTGN---- 319
||:|.|.|:|:|...|:..:.|.
BPUM_0709___y 300 NSKEAKIFMEDQLRRYEQFIQGEQAVE 326
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