Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01275 and BPUM_0708
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence pep-align/BSNT_01275___citT.1.24716.seq
# -bsequence pep-align/BPUM_0708___citT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01275___citT-BPUM_0708___citT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01275___citT-BPUM_0708___citT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01275___citT
# 2: BPUM_0708___citT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity: 137/235 (58.3%)
# Similarity: 179/235 (76.2%)
# Gaps: 11/235 ( 4.7%)
# Score: 698.0
#
#
#=======================================
BSNT_01275___ 1 -MIHIAIAEDDFRVAQIHERLIKQLDGFKIIGKAANAKETLALLKEHKVD 49
::.:.|||||||:|.||...|:|::||::.|||.:||:....|::.:||
BPUM_0708___c 1 MVMKVLIAEDDFRIAAIHASYIQQIEGFQVAGKAKSAKDMWEALQQEQVD 50
BSNT_01275___ 50 LLLLDIYMPDELGTALIPDIRSRFPEVDIMIITAATETRHLQEALRAGIA 99
|:|||:||||||||.|:|.:|.|:||||:|||||||||..|::||:.|:.
BPUM_0708___c 51 LILLDVYMPDELGTNLLPLLRERYPEVDVMIITAATETTLLRDALQYGVV 100
BSNT_01275___ 100 HYLIKPVTADKFRQVLLQYKEKRKLLMSQPEVSQSMIDHIFGNSVKTALP 149
|||||||||.||.|||.:||||:.::.|:.||:|:|||..||...:. |
BPUM_0708___c 101 HYLIKPVTAQKFAQVLTEYKEKKDMINSKDEVNQTMIDLFFGQMQEE--P 148
BSNT_01275___ 150 AE----DLPTGINSITLRKIKEALQTASEGLTAEELGEKMGASRTTARRY 195
.| ||||||||:||.|:|..:::.::|::||||||||||||||||||
BPUM_0708___c 149 KEKGDRDLPTGINSLTLDKVKTLIESENDGISAEELGEKMGASRTTARRY 198
BSNT_01275___ 196 AEYLVSKEEARAELEYGIIGRPERKYYLAAD---- 226
.||||:..|.||||.||||||||||||.|..
BPUM_0708___c 199 VEYLVTTGECRAELAYGIIGRPERKYYPAKKQAES 233
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