Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01256 and BPUM_0691
See
DNA alignment /
Visit
BSNT_01256 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence pep-align/BSNT_01256___yfmR.1.24716.seq
# -bsequence pep-align/BPUM_0691___yfmR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01256___yfmR-BPUM_0691___yfmR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01256___yfmR-BPUM_0691___yfmR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01256___yfmR
# 2: BPUM_0691___yfmR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity: 469/630 (74.4%)
# Similarity: 546/630 (86.7%)
# Gaps: 4/630 ( 0.6%)
# Score: 2446.5
#
#
#=======================================
BSNT_01256___ 1 MSILKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKVIA 50
||:|..|.||||||:||||||||||||..|||||||||||||||||||||
BPUM_0691___y 1 MSLLNVEGLYKTYGEKTLFDHISFHIEPKERIGLIGPNGTGKSTLLKVIA 50
BSNT_01256___ 51 GLESIEEGEITKSGSVQVEFLHQDPELPAGQTVLEHIYSGESAVMKTLRE 100
||||.|||:|||:|::.:|||.||||:...:|:|::|:||.:.:::|::.
BPUM_0691___y 51 GLESFEEGDITKAGTLDIEFLEQDPEMDGDETILDYIFSGTAPMIQTMKA 100
BSNT_01256___ 101 YEKALYELGKDPENEQRQKHLLAAQAKMDANNAWDANTLAKTVLSKLGVN 150
||:||.:|..||:||.:|:.|:..|.:||..:|||||..|||:|:||||.
BPUM_0691___y 101 YEQALADLEHDPQNEAKQEALMRMQNRMDQEDAWDANLSAKTILTKLGVK 150
BSNT_01256___ 151 DVTKPVNELSGGQKKRVAIAKNLIQPADLLILDEPTNHLDNETIEWLEGY 200
||::.|:.|||||||||||||||||||.|||||||||||||.||||||||
BPUM_0691___y 151 DVSRSVHALSGGQKKRVAIAKNLIQPAGLLILDEPTNHLDNATIEWLEGY 200
BSNT_01256___ 201 LSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAER 250
||||.|||:||||||||||||.||||||.:|.||||||||||||||||||
BPUM_0691___y 201 LSQYSGAVILVTHDRYFLNRVANRIYELNQGQLYTYKGNYEVFLEKRAER 250
BSNT_01256___ 251 EAQAEQKETKRQNLLRRELAWLRRGAKARSTKQKARIDRVETLKEQKGPQ 300
||:|:.|||||||||||||||||||||||:|||||||.|.|.|.:||||.
BPUM_0691___y 251 EAEAQVKETKRQNLLRRELAWLRRGAKARTTKQKARIGRAEELMDQKGPD 300
BSNT_01256___ 301 SSGSLDFAIGSHRLGKQVIEAENVMIAYDGRMLVDRFNELVIPGERIGII 350
:.|.||||||||||||||||||::.|::.|:.||::|.:||:||:|||.|
BPUM_0691___y 301 AKGELDFAIGSHRLGKQVIEAEDLSISFAGQTLVEQFTDLVVPGDRIGFI 350
BSNT_01256___ 351 GPNGIGKTTLLNALAGRHTPDGGDITIGQTVRIGYYTQDHSEMNGELKVI 400
||||:|||||||.|||:..|..|.:|||||||||||||||.||:.||.:|
BPUM_0691___y 351 GPNGVGKTTLLNCLAGKIEPTSGQLTIGQTVRIGYYTQDHKEMDEELTII 400
BSNT_01256___ 401 DYIKETAEVVKTADGDMITAEQMLERFLFPRSMQQTYIRKLSGGEKRRLY 450
:|||||||:|||:|..::||||||||||||||||:|:||||||||:||||
BPUM_0691___y 401 EYIKETAEIVKTSDDAIVTAEQMLERFLFPRSMQRTFIRKLSGGERRRLY 450
BSNT_01256___ 451 LLQVLMQEPNVLFLDEPTNDLDTETLSVLEDYIDQFPGVVITVSHDRYFL 500
||:|||:||||||||||||||||||||:||||::||||||:|||||||||
BPUM_0691___y 451 LLKVLMEEPNVLFLDEPTNDLDTETLSILEDYLEQFPGVVMTVSHDRYFL 500
BSNT_01256___ 501 DRVVDRLIVFEGNGVISRFQGSYSDYMEESKAKKAAQ-KPTAEEKTAEAE 549
||||.||:||||||.||.:||:||||||:.|.:|..: ||. ||..||.
BPUM_0691___y 501 DRVVHRLLVFEGNGRISHYQGAYSDYMEQEKEQKRTETKPA--EKQVEAA 548
BSNT_01256___ 550 PKKKRKKLSYKDQLEWDGIEDKIAQLEEKHEQLEADIAAAGSDFGKIQEL 599
| |||||||||||||||||||:|..|||||:||||.||.|||||||||||
BPUM_0691___y 549 P-KKRKKLSYKDQLEWDGIEDRIQALEEKHQQLEASIAEAGSDFGKIQEL 597
BSNT_01256___ 600 MAEQAKTAEELEAAMDRWTELSLMIEELES 629
|.||...|||||.|||||||||:||||||.
BPUM_0691___y 598 MDEQKAVAEELEQAMDRWTELSIMIEELEG 627
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.