Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03140 and BPUM_0687

See DNA alignment / Visit BSNT_03140 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_03140___yozN.1.24716.seq
#    -bsequence pep-align/BPUM_0687___yozN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03140___yozN-BPUM_0687___yozN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03140___yozN-BPUM_0687___yozN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03140___yozN
# 2: BPUM_0687___yozN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      76/87 (87.4%)
# Similarity:    80/87 (92.0%)
# Gaps:           2/87 ( 2.3%)
# Score: 393.5
# 
#
#=======================================

BSNT_03140___      1 MVQPTPYININIFMLKINSFENASAVNVGQNLLAEWQNSDKKNQGYGQNF     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0687___y      1 MVQPTPYININIFMLKINSFENASAVNVGQNLLAEWQNSDKKNQGYGQNF     50

BSNT_03140___     51 GDASGFMGTRSHVDDRDQIDSPASFESEAVNSSIKRK     87
                     ||||||:||:||||||||:||||||...|  ..|:||
BPUM_0687___y     51 GDASGFVGTKSHVDDRDQVDSPASFSPTA--KPIQRK     85


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.