Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03139 and BPUM_0686

See DNA alignment / Visit BSNT_03139 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_03139___yocM.1.24716.seq
#    -bsequence pep-align/BPUM_0686___yocM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03139___yocM-BPUM_0686___yocM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03139___yocM-BPUM_0686___yocM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03139___yocM
# 2: BPUM_0686___yocM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     112/160 (70.0%)
# Similarity:   138/160 (86.2%)
# Gaps:           3/160 ( 1.9%)
# Score: 634.0
# 
#
#=======================================

BSNT_03139___      1 MDFEKMKQWMEFAQQMYGGDFWKQVFDEDQKTPFMTNGQSPFPFAQQDQR     50
                     ||||||||||:.||||:|.||||.:||::|::|||.||.|||.|.|||||
BPUM_0686___y      1 MDFEKMKQWMDIAQQMHGDDFWKMIFDDEQRSPFMANGPSPFTFTQQDQR     50

BSNT_03139___     51 GKGDASFPSMDIVDTVTEVQFLIYLPGYRKQDVHILSYGDYLVVKGQRFS    100
                     |: |||||.:|:|:|.||:|:|||||||||:||.:||||:||||||||||
BPUM_0686___y     51 GQ-DASFPPIDMVETATEIQYLIYLPGYRKEDVQVLSYGEYLVVKGQRFS     99

BSNT_03139___    101 YFNEQDFRQKEGRYGSFEKKIPLSDHLHGKMNAIFKDGILYITIQKDEGQ    150
                     :|||||||||:|:||.|||||.|.:.:.|:|||.||||:|||.:|||||:
BPUM_0686___y    100 FFNEQDFRQKQGKYGPFEKKIRLPEMILGQMNAAFKDGVLYIRLQKDEGK    149

BSNT_03139___    151 AKTIVIDD--    158
                     |..|:|||  
BPUM_0686___y    150 ATAIIIDDEY    159


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