Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03136 and BPUM_0685

See DNA alignment / Visit BSNT_03136 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_03136___yocL.1.24716.seq
#    -bsequence pep-align/BPUM_0685___yocL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03136___yocL-BPUM_0685___yocL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03136___yocL-BPUM_0685___yocL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03136___yocL
# 2: BPUM_0685___yocL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      55/117 (47.0%)
# Similarity:    72/117 (61.5%)
# Gaps:           7/117 ( 6.0%)
# Score: 250.5
# 
#
#=======================================

BSNT_03136___      1 ---MKKMFRSLIRHCLKPELDKLRECEERLSVIE-KQKQSSKQESEETYI     46
                        :|....||.:.........:.|.|:||:.:| |...|:...||:|:|
BPUM_0685___y      1 MVYLKHFILSLFKKTESSPSPSVTELEKRLTALEQKMSASASPVSEDTHI     50

BSNT_03136___     47 HIETLNVEKIDYHLEFGELTIDELSGRLNIGATYYIPPEEKDKKC--QRK     94
                     |||:|:|:|||||||||||:||:|.||||||||||.|.:...||.  ..|
BPUM_0685___y     51 HIESLHVDKIDYHLEFGELSIDQLQGRLNIGATYYTPKDTHIKKSAPPPK    100

BSNT_03136___     95 PEAPSTPAVTIRSKRQ-    110
                     |:...||.|:||||.. 
BPUM_0685___y    101 PKETKTPTVSIRSKPHS    117


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