Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00725 and BPUM_0683
See
DNA alignment /
Visit
BSNT_00725 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:29
# Commandline: needle
# -asequence pep-align/BSNT_00725___pbpC.1.24716.seq
# -bsequence pep-align/BPUM_0683.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00725___pbpC-BPUM_0683.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00725___pbpC-BPUM_0683.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00725___pbpC
# 2: BPUM_0683
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 702
# Identity: 254/702 (36.2%)
# Similarity: 391/702 (55.7%)
# Gaps: 57/702 ( 8.1%)
# Score: 1161.5
#
#
#=======================================
BSNT_00725___ 1 ---------------------MLKKCILLVFLCVGLIGLIGCSKTDSPED 29
::...:...||...|. ||......
BPUM_0683 1 MYTDQRKSFWKQKKVMIPILSVIVVAVAFFFLKDSLF-----SKEKEALK 45
BSNT_00725___ 30 RMEAFVKQWNDQQFDDMYQSLTKDVKK--EISKKDFVNRYKAIYEQAGVK 77
..::|.||...:.|..:...:|....| :.|||....:|..|:...|..
BPUM_0683 46 AAQSFTKQMEKKDFTKLADEVTSASLKANDFSKKQLAEKYDNIFNGIGAY 95
BSNT_00725___ 78 NLKVTAGEVDKDDQDNKTMKHIPYKVSMNTNAG---KVSFKNTAVLKLEK 124
:|.::...|:|.|:.|. ....|.|:|.|:.| |:|:|.. |.|
BPUM_0683 96 DLNISKLNVEKQDKGNG--YQFSYDVTMKTSFGKLHKLSYKGV----LSK 139
BSNT_00725___ 125 TDDEESWNIDWDPSFIFKQLADDKTVQIMSIEPKRGQIYDKNGKGLAVNT 174
.||: |.:||.|:.||.|:....|:::.|....||.|.|:.|:.||..|
BPUM_0683 140 EDDK--WKVDWKPNLIFPQMEKGDTIKVKSDPAVRGNIVDRKGRTLAETT 187
BSNT_00725___ 175 DVPEIGIVPGEL--GDKKEKVIKELAKKLDLTEDDIKKKLDQGWVKDDSF 222
....:||:||:| |::||:.||:::|..|:.|:.|..:|.|.||.||:|
BPUM_0683 188 GGSALGIIPGKLGTGEEKERNIKKISKAFDIDEELIDNQLKQAWVTDDTF 237
BSNT_00725___ 223 VPLKKVKPDQEKLVSEATSLQGVTRTNVSSRYYPYGEKTAHLTGYVRAIT 272
||||.:. ::|.:.: .::|||..:...|||||.:..|||||||....
BPUM_0683 238 VPLKSML--EQKPIPK--DIKGVTYQSKEMRYYPYNKAAAHLTGYVGKAN 283
BSNT_00725___ 273 AEELKKKKEGTYSDTSNIGIAGLENVYEDKLRGTTGWKIYV--PQTG--E 318
|:::|:.. .......||..|||..::..|||..|..|.: .:|| |
BPUM_0683 284 ADDIKRNP--ALKADQIIGKTGLEFTFDKNLRGQDGGSILIVHDETGIEE 331
BSNT_00725___ 319 VIAEKKAKDGEDLHLTIDIKTQTKLYDELKDDSGAAVALQPKTGETLALV 368
.:.:...:||:.:.||||...|.|.|::||.:.||...:.|.:|:.||||
BPUM_0683 332 TLQKSDRQDGKTVKLTIDASLQKKAYEQLKGEKGAVTIMNPSSGDLLALV 381
BSNT_00725___ 369 SAPSYDPNGFIFGWSDKEWKKLNKDKNNPFSAKFNKTYAPGSTIKPIAAA 418
||||||.|....|.:.||::..:::.:.||.|::...||||||.|.|.||
BPUM_0683 382 SAPSYDVNLMTNGITPKEYQAYSENPDLPFQARYASRYAPGSTFKTITAA 431
BSNT_00725___ 419 IGIKNGTLKADEKKTIKGKEWQKDSSWGGYSVTRVSERLQQVDLENALIT 468
||::.|..|..:.:||.|.:||||.|||.|.:|||.:: :.|::.:||:.
BPUM_0683 432 IGLETGVTKPHKVRTIHGLKWQKDQSWGNYRITRVHDK-ENVNMVDALVY 480
BSNT_00725___ 469 SDNIYFAQNALDMGADTFTKGLKTFGFSEDVPYEFPIQKSSIANDKLDSD 518
||||||.|.||::|.||:.|.:|.|||.||:...|.::.:.::||.:.||
BPUM_0683 481 SDNIYFGQEALEIGKDTYEKKVKAFGFGEDLHMPFTMKPAQVSNDGIQSD 530
BSNT_00725___ 519 ILLADTGYGQGQMQMSPLHLATAYTPFVDNGDLVKPTLIKKDSQTADVWH 568
|||||:.||||::.|||:....||:||...|.||.|.:: :|.:||. .
BPUM_0683 531 ILLADSAYGQGELLMSPIEQVHAYSPFATGGKLVYPRVV-QDEKTAS--P 577
BSNT_00725___ 569 KQVVTKEGAADITKGLKGVVEDERGSAYQPVVKGITVAGKTGTAELKTSK 618
||:|.::.|..:...|..||....|:|:...::|..:|.||||||||:.:
BPUM_0683 578 KQIVKEDSANTVKDALTQVVTSPNGTAHSLQMEGADIAAKTGTAELKSKQ 627
BSNT_00725___ 619 DDKDGTENGWFVGYDYKNKDLLVAMMIQNVQDRGGSHYVVEKAKKQFQSN 668
...||:|||:.:.::.|.:|.::..||::|::||||..|::|.|....|.
BPUM_0683 628 GATDGSENGFLLAFNPKKEDYVLVGMIEDVKNRGGSGLVIQKMKPVIASF 677
BSNT_00725___ 668 -- 668
BPUM_0683 678 YK 679
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.