Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01248 and BPUM_0681
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence pep-align/BSNT_01248___yfnC.1.24716.seq
# -bsequence pep-align/BPUM_0681.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01248___yfnC-BPUM_0681.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01248___yfnC-BPUM_0681.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01248___yfnC
# 2: BPUM_0681
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 297/412 (72.1%)
# Similarity: 344/412 (83.5%)
# Gaps: 3/412 ( 0.7%)
# Score: 1504.0
#
#
#=======================================
BSNT_01248___ 1 MAIAAPLKEKTVQK-PGTTVYPILIIIGICHMLNDSLQAVIPAMFPILER 49
|||||..|:|.... .|:||||||:||||||||||:||||||||||||||
BPUM_0681 1 MAIAARTKDKPQNSVTGSTVYPILLIIGICHMLNDTLQAVIPAMFPILER 50
BSNT_01248___ 50 SMSLTFTQLGIIAFTLNMVSSVMQPVVGWYTDKRPRPYALPVGLTASMLG 99
||.|||||||:||||||||||||||.:||||||||.|||||:.|.:|.:|
BPUM_0681 51 SMGLTFTQLGLIAFTLNMVSSVMQPAIGWYTDKRPMPYALPIALFSSAVG 100
BSNT_01248___ 100 ILGLAFAPSFITILCCVFFIGLGSAIFHPEGSRVAYMAAGTKRGLAQSIY 149
|.||||||||.|||.||.|||||||||||||||||.||||.:||||||||
BPUM_0681 101 IFGLAFAPSFATILLCVVFIGLGSAIFHPEGSRVANMAAGPRRGLAQSIY 150
BSNT_01248___ 150 QVGGNSGQAMAPLITALILVPLGQFGAVWFTLVAALAVLFLMYIAKWYAS 199
|||||:|||.||||.||:||||||.|..|||:|..:||.||:||::|||.
BPUM_0681 151 QVGGNTGQAFAPLIAALMLVPLGQPGVAWFTIVGMIAVGFLLYISRWYAG 200
BSNT_01248___ 200 RLGSL-AQKSGKQKKTAENTAITKSVVSALIIIIFLIFARSWYTSAIGNF 248
||.:: ||......|.|.:....||.::||.||:|||||||||.:||.||
BPUM_0681 201 RLQTIRAQAKKAPAKAARSELHRKSALTALGIIVFLIFARSWYGNAISNF 250
BSNT_01248___ 249 YTFYAMDTYHVSIQQAQSYIFVFLLFGAIGTFLGGPLADRFGKRFVILGS 298
|.|||::.|.::|:::|:|||:||:.|||||||||||||||||:.|||.|
BPUM_0681 251 YAFYAIEQYGLTIKESQTYIFLFLILGAIGTFLGGPLADRFGKKTVILIS 300
BSNT_01248___ 299 LLCSAPLAIVLPFAGPVLAYGVLALIGLVLMSSFSVTVVYAQELVPGKIG 348
||.|.|||::|||||||.||.:|.|||::|.|||||||||||||.|||||
BPUM_0681 301 LLASFPLALLLPFAGPVFAYVLLGLIGVILTSSFSVTVVYAQELFPGKIG 350
BSNT_01248___ 349 TMSGLTVGLAFGMGAIGAVALGALIDAAGLTPTMIAIAFLPVLGILAFLL 398
|||||||||||||||||:||||:.||..|||||||.:||||:||||||||
BPUM_0681 351 TMSGLTVGLAFGMGAIGSVALGSFIDTFGLTPTMIGVAFLPILGILAFLL 400
BSNT_01248___ 399 PSDQKLREWHS- 409
||||.:.:|:.
BPUM_0681 401 PSDQTISKWNES 412
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