Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01248 and BPUM_0681

See DNA alignment / Visit BSNT_01248 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence pep-align/BSNT_01248___yfnC.1.24716.seq
#    -bsequence pep-align/BPUM_0681.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01248___yfnC-BPUM_0681.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01248___yfnC-BPUM_0681.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01248___yfnC
# 2: BPUM_0681
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity:     297/412 (72.1%)
# Similarity:   344/412 (83.5%)
# Gaps:           3/412 ( 0.7%)
# Score: 1504.0
# 
#
#=======================================

BSNT_01248___      1 MAIAAPLKEKTVQK-PGTTVYPILIIIGICHMLNDSLQAVIPAMFPILER     49
                     |||||..|:|.... .|:||||||:||||||||||:||||||||||||||
BPUM_0681          1 MAIAARTKDKPQNSVTGSTVYPILLIIGICHMLNDTLQAVIPAMFPILER     50

BSNT_01248___     50 SMSLTFTQLGIIAFTLNMVSSVMQPVVGWYTDKRPRPYALPVGLTASMLG     99
                     ||.|||||||:||||||||||||||.:||||||||.|||||:.|.:|.:|
BPUM_0681         51 SMGLTFTQLGLIAFTLNMVSSVMQPAIGWYTDKRPMPYALPIALFSSAVG    100

BSNT_01248___    100 ILGLAFAPSFITILCCVFFIGLGSAIFHPEGSRVAYMAAGTKRGLAQSIY    149
                     |.||||||||.|||.||.|||||||||||||||||.||||.:||||||||
BPUM_0681        101 IFGLAFAPSFATILLCVVFIGLGSAIFHPEGSRVANMAAGPRRGLAQSIY    150

BSNT_01248___    150 QVGGNSGQAMAPLITALILVPLGQFGAVWFTLVAALAVLFLMYIAKWYAS    199
                     |||||:|||.||||.||:||||||.|..|||:|..:||.||:||::|||.
BPUM_0681        151 QVGGNTGQAFAPLIAALMLVPLGQPGVAWFTIVGMIAVGFLLYISRWYAG    200

BSNT_01248___    200 RLGSL-AQKSGKQKKTAENTAITKSVVSALIIIIFLIFARSWYTSAIGNF    248
                     ||.:: ||......|.|.:....||.::||.||:|||||||||.:||.||
BPUM_0681        201 RLQTIRAQAKKAPAKAARSELHRKSALTALGIIVFLIFARSWYGNAISNF    250

BSNT_01248___    249 YTFYAMDTYHVSIQQAQSYIFVFLLFGAIGTFLGGPLADRFGKRFVILGS    298
                     |.|||::.|.::|:::|:|||:||:.|||||||||||||||||:.|||.|
BPUM_0681        251 YAFYAIEQYGLTIKESQTYIFLFLILGAIGTFLGGPLADRFGKKTVILIS    300

BSNT_01248___    299 LLCSAPLAIVLPFAGPVLAYGVLALIGLVLMSSFSVTVVYAQELVPGKIG    348
                     ||.|.|||::|||||||.||.:|.|||::|.|||||||||||||.|||||
BPUM_0681        301 LLASFPLALLLPFAGPVFAYVLLGLIGVILTSSFSVTVVYAQELFPGKIG    350

BSNT_01248___    349 TMSGLTVGLAFGMGAIGAVALGALIDAAGLTPTMIAIAFLPVLGILAFLL    398
                     |||||||||||||||||:||||:.||..|||||||.:||||:||||||||
BPUM_0681        351 TMSGLTVGLAFGMGAIGSVALGSFIDTFGLTPTMIGVAFLPILGILAFLL    400

BSNT_01248___    399 PSDQKLREWHS-    409
                     ||||.:.:|:. 
BPUM_0681        401 PSDQTISKWNES    412


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