Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01247 and BPUM_0680

See DNA alignment / Visit BSNT_01247 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence pep-align/BSNT_01247___yfnD.1.24716.seq
#    -bsequence pep-align/BPUM_0680___yfnD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01247___yfnD-BPUM_0680___yfnD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01247___yfnD-BPUM_0680___yfnD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01247___yfnD
# 2: BPUM_0680___yfnD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity:     158/311 (50.8%)
# Similarity:   206/311 (66.2%)
# Gaps:          22/311 ( 7.1%)
# Score: 893.0
# 
#
#=======================================

BSNT_01247___      1 --------------------MIHSLHEHCDDFHLYVLCVDQKAYELLQHV     30
                                         :||||.:....|.|.|||.|..||::|...
BPUM_0680___y      1 MASYHFTTIVSNTHVFKLLALIHSLEQTSRSFKLSVLCADPLAYQVLSEF     50

BSNT_01247___     31 PWEHVTFVQLHEMEDPELLKAKSNRTFHEYCWTLKPAFLFHVMSKWDDAE     80
                     |..||.:.||..:||.:|.|||.:|||||||||||||||..::.. .:|:
BPUM_0680___y     51 PHPHVQYEQLENIEDDKLRKAKDDRTFHEYCWTLKPAFLLKILES-SEAD     99

BSNT_01247___     81 YFAHMDTDLFFFSDPARIFAENPTASLYLTDHRNSPRFMSYYDRTGRFNT    130
                     |.||:||||:|:.||..||||||.|.|:||||.||.||..:|:.:|||||
BPUM_0680___y    100 YLAHLDTDLYFYHDPEAIFAENPLAHLFLTDHMNSERFYHFYELSGRFNT    149

BSNT_01247___    131 GFVGAGNTKEAYEAVWQWRQDCIEFCTVEMDTERKTYGDQRYVEKWPEQF    180
                     ||||..||..|..||.||:::|:..|||||||:.||||||||||:|.:.|
BPUM_0680___y    150 GFVGCRNTDVAKRAVTQWKENCLAHCTVEMDTKNKTYGDQRYVERWIDDF    199

BSNT_01247___    181 KGVHVVKSIGANTALWNIENYKVGQKDGRVYIDETPLIFYHFSGFTLVTE    230
                     :|||||.|.|||.|:|||||||:....|.:|:||.||:|||||.||::.|
BPUM_0680___y    200 EGVHVVTSKGANAAIWNIENYKLSVVKGDMYLDECPLLFYHFSAFTIIDE    249

BSNT_01247___    231 KEFNLCWYYRIEDEATIEMIYMPYILNLKRWIDEIQSAFPDFADGFIPKH    280
                     ..|||.|||.:.::..::.:|:||...:.:.|.::|..||:|..|||.|.
BPUM_0680___y    250 NTFNLNWYYYMTEQNLVDHLYIPYADLIHQKIKQVQKVFPEFQQGFITKK    299

BSNT_01247___    281 AVPDTHFIQLD    291
                     .||||||.:: 
BPUM_0680___y    300 HVPDTHFYEI-    309


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