Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01246 and BPUM_0679
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence pep-align/BSNT_01246___yfnE.1.24716.seq
# -bsequence pep-align/BPUM_0679___yfnE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01246___yfnE-BPUM_0679___yfnE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01246___yfnE-BPUM_0679___yfnE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01246___yfnE
# 2: BPUM_0679___yfnE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity: 219/398 (55.0%)
# Similarity: 286/398 (71.9%)
# Gaps: 8/398 ( 2.0%)
# Score: 1120.5
#
#
#=======================================
BSNT_01246___ 1 ----MKASVIIPAYNSKERLYNSLLSLNQQECDEEFEVIVADNGSEDGTL 46
.|.|||||:||:||||..||.||..|:.|..||||||||||.|||:
BPUM_0679___y 1 MNEKPKVSVIIPSYNAKERLEGSLFSLTLQDTDIPFEVIVADNGSMDGTM 50
BSNT_01246___ 47 SMLESFQADFPLIFTRIKENRGIAYGRNQALRNARGDILIFHDSDMLAAK 96
.|||:.:.:||....||..|:|||.|||.|:|.|.||:||||||||||..
BPUM_0679___y 51 EMLENIEVNFPFKKVRIPVNQGIAKGRNHAIREAEGDLLIFHDSDMLAEP 100
BSNT_01246___ 97 DLVAKHIKAHENEENLVVCGLFWKRIYSFYYERFEEEHKEQLAKLTG--E 144
..:.||.:||.::|:||:||:.|||||.::||.|:::|.::|.| .| :
BPUM_0679___y 101 QFIQKHAEAHAHQEDLVICGVCWKRIYRYFYEAFDKDHIKRLKK-QGLYK 149
BSNT_01246___ 145 MPKKDKQKLLEEADIKNGSFLDKSFDLDTDFIDVLKKILDEYGDDLKGYH 194
...|||..||...:::||:||:|||||.::|||:||.||..|..||..|.
BPUM_0679___y 150 RKMKDKTPLLSMQEVENGAFLEKSFDLQSEFIDILKDILRTYNYDLGSYE 199
BSNT_01246___ 195 MPWRFFITNNSSVKRKHVVDLGLFDEGIVRYGFEDYDLGIRLHQAGLTFR 244
:|||||||||||||||||:.||:|||.|||||||||||||||||.||:|.
BPUM_0679___y 200 LPWRFFITNNSSVKRKHVIALGMFDEKIVRYGFEDYDLGIRLHQLGLSFE 249
BSNT_01246___ 245 LRRDIVSVHQEHPSNCKSVDDIRANIAYMCDKYNNIRSLDVHLAFNGPFP 294
||.||:|||||||||..|.|||:.||.|||:|||||.::||||||:|||.
BPUM_0679___y 250 LREDILSVHQEHPSNLTSFDDIKYNILYMCEKYNNIDAIDVHLAFSGPFS 299
BSNT_01246___ 295 PDMTNRIMADIQKLLESQKYDMLLNLFLELLHVVKERNIDPDWRKKSPRV 344
..:||.|:.:|::|.|:..:|.||:.||||||::.|||:... |.|..::
BPUM_0679___y 300 HTVTNDIVKEIRQLRENPVFDGLLSYFLELLHLITERNVGIK-RDKKDQL 348
BSNT_01246___ 345 TAKSFDLQTVRKLLPKAKKKLGVNDFANALYALVNDLLHVDLRSLDVV 392
|||...|:.:.::...|:::.|......|:..|..:||.|||..:||:
BPUM_0679___y 349 TAKHVPLKKLSEIAQLARQEYGCTVLVEAIQGLTKELLRVDLFQVDVL 396
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