Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01245 and BPUM_0678
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence pep-align/BSNT_01245___yfnF.1.24716.seq
# -bsequence pep-align/BPUM_0678___yfnF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01245___yfnF-BPUM_0678___yfnF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01245___yfnF-BPUM_0678___yfnF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01245___yfnF
# 2: BPUM_0678___yfnF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity: 177/304 (58.2%)
# Similarity: 225/304 (74.0%)
# Gaps: 2/304 ( 0.7%)
# Score: 963.0
#
#
#=======================================
BSNT_01245___ 1 MTSAYCTVLSKGRLYQAVALFKSLELVDQDSPIFILCMDEDTHRVLQKLK 50
|.|.||||||.||||||:|.|.||:.|:..:.|..||||:....:|.::.
BPUM_0678___y 1 MNSIYCTVLSSGRLYQAIAFFLSLKQVENGAVIKTLCMDDAAFNLLHQMN 50
BSNT_01245___ 51 MKQLNLVPVAALENELLLKLKETRDQSEYCWTMKPIFLQAVLNSNPGLER 100
...::||.|..||...||:.||.||.||||||:||::::.:...... |.
BPUM_0678___y 51 FPHVDLVHVRELETPELLEKKEERDASEYCWTLKPMWIEWLFEQEQA-ES 99
BSNT_01245___ 101 VTYIDGDLFFYADPSPIFENQPDCSVLLSRGDIVIPSFEKEQIDMLQRLL 150
|||:|.|||||..|..||::|||.||||||||||||||:.|::.|||:||
BPUM_0678___y 100 VTYLDADLFFYESPQVIFQHQPDASVLLSRGDIVIPSFDPEEVKMLQKLL 149
BSNT_01245___ 151 GRYNSGFISFKHDDAGTDCLEWWKERCLEECKNAPGEGKFGDQGYLDYMS 200
|||||||:.||.|:||..||.||||.||:||||||||||||||||||:|.
BPUM_0678___y 150 GRYNSGFLHFKGDEAGRKCLSWWKEECLKECKNAPGEGKFGDQGYLDHMP 199
BSNT_01245___ 201 ELFPNVCDITTPGVNIGHWNYGQHTFSWKDGRIVLEDGSPLIFYHFSGYR 250
:||..|.||.|.||||||||||||::..::|||:||||.|||.|||||:|
BPUM_0678___y 200 KLFEKVEDIQTKGVNIGHWNYGQHSYREENGRILLEDGHPLICYHFSGFR 249
BSNT_01245___ 251 IVSINEIKQIHETTRTDLPFVHELYQETLPHIIQHMQTLDPEFNGFASKD 300
|||.:|::||||..|.||||..|.|:..|.|:|:.::.:||.|||:|..:
BPUM_0678___y 250 IVSKDEMQQIHEKGREDLPFFQEAYRNVLRHVIESVEQVDPMFNGYAKVE 299
BSNT_01245___ 301 DNK- 303
::.
BPUM_0678___y 300 EDDA 303
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