Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01245 and BPUM_0678

See DNA alignment / Visit BSNT_01245 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence pep-align/BSNT_01245___yfnF.1.24716.seq
#    -bsequence pep-align/BPUM_0678___yfnF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01245___yfnF-BPUM_0678___yfnF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01245___yfnF-BPUM_0678___yfnF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01245___yfnF
# 2: BPUM_0678___yfnF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     177/304 (58.2%)
# Similarity:   225/304 (74.0%)
# Gaps:           2/304 ( 0.7%)
# Score: 963.0
# 
#
#=======================================

BSNT_01245___      1 MTSAYCTVLSKGRLYQAVALFKSLELVDQDSPIFILCMDEDTHRVLQKLK     50
                     |.|.||||||.||||||:|.|.||:.|:..:.|..||||:....:|.::.
BPUM_0678___y      1 MNSIYCTVLSSGRLYQAIAFFLSLKQVENGAVIKTLCMDDAAFNLLHQMN     50

BSNT_01245___     51 MKQLNLVPVAALENELLLKLKETRDQSEYCWTMKPIFLQAVLNSNPGLER    100
                     ...::||.|..||...||:.||.||.||||||:||::::.:...... |.
BPUM_0678___y     51 FPHVDLVHVRELETPELLEKKEERDASEYCWTLKPMWIEWLFEQEQA-ES     99

BSNT_01245___    101 VTYIDGDLFFYADPSPIFENQPDCSVLLSRGDIVIPSFEKEQIDMLQRLL    150
                     |||:|.|||||..|..||::|||.||||||||||||||:.|::.|||:||
BPUM_0678___y    100 VTYLDADLFFYESPQVIFQHQPDASVLLSRGDIVIPSFDPEEVKMLQKLL    149

BSNT_01245___    151 GRYNSGFISFKHDDAGTDCLEWWKERCLEECKNAPGEGKFGDQGYLDYMS    200
                     |||||||:.||.|:||..||.||||.||:||||||||||||||||||:|.
BPUM_0678___y    150 GRYNSGFLHFKGDEAGRKCLSWWKEECLKECKNAPGEGKFGDQGYLDHMP    199

BSNT_01245___    201 ELFPNVCDITTPGVNIGHWNYGQHTFSWKDGRIVLEDGSPLIFYHFSGYR    250
                     :||..|.||.|.||||||||||||::..::|||:||||.|||.|||||:|
BPUM_0678___y    200 KLFEKVEDIQTKGVNIGHWNYGQHSYREENGRILLEDGHPLICYHFSGFR    249

BSNT_01245___    251 IVSINEIKQIHETTRTDLPFVHELYQETLPHIIQHMQTLDPEFNGFASKD    300
                     |||.:|::||||..|.||||..|.|:..|.|:|:.::.:||.|||:|..:
BPUM_0678___y    250 IVSKDEMQQIHEKGREDLPFFQEAYRNVLRHVIESVEQVDPMFNGYAKVE    299

BSNT_01245___    301 DNK-    303
                     ::. 
BPUM_0678___y    300 EDDA    303


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