Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01362 and BPUM_0660

See DNA alignment / Visit BSNT_01362 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_01362___malP.1.24716.seq
#    -bsequence pep-align/BPUM_0660___malP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01362___malP-BPUM_0660___malP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01362___malP-BPUM_0660___malP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01362___malP
# 2: BPUM_0660___malP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 532
# Identity:     293/532 (55.1%)
# Similarity:   387/532 (72.7%)
# Gaps:          11/532 ( 2.1%)
# Score: 1562.0
# 
#
#=======================================

BSNT_01362___      1 MMQKIQRFGSAMFVPVLLFAFAGIIVGISTLFKNKTLMGPLADPDGFWYQ     50
                      |..|:||||||.||||||||.||:||::||.||..:||.:|.....||:
BPUM_0660___m      1 -MNAIKRFGSAMVVPVLLFAFFGIVVGLATLCKNPAIMGEMAAEGTMWYK     49

BSNT_01362___     51 CWYIIEQGGWTVFNQMPLLFAIGIPVALAKKAQARACLEALTVYLTFNYF    100
                     .|.:||.||||:||.|.|.|.||:|::|||||||||.|.||.:||.||.:
BPUM_0660___m     50 IWTLIESGGWTIFNHMELAFVIGLPISLAKKAQARATLAALMIYLVFNNY     99

BSNT_01362___    101 VSAILTVWGGAFGVDMNQEVGGTSGLTMIAGIKTLDTNIIGAIFISSIVV    150
                     :.||||:|...||||::|.|...:|:..||||.||||:||||:.||.||:
BPUM_0660___m    100 IHAILTLWPSTFGVDLSQGVENVAGVKEIAGIPTLDTSIIGAVAISGIVI    149

BSNT_01362___    151 FLHNRYFDKKLPDFLGIFQGSTYIVMISFFIMIPIALAVSYIWPMVQSGI    200
                     ::|||::|:|||:.||||||..::|:|.||:|||||..|:::||.||.||
BPUM_0660___m    150 WIHNRFYDQKLPEMLGIFQGLVFVVIIGFFVMIPIAFIVAFVWPYVQQGI    199

BSNT_01362___    201 GSLQSFLVASGAVGVWIYTFLERILIPTGLHHFIYTPFIYGPAVAEGGIV    250
                     .|||.|:..||.:|||::.||||:||||||||||||||.:|||...||:.
BPUM_0660___m    200 QSLQGFMSQSGYIGVWLFHFLERVLIPTGLHHFIYTPFEFGPAAVNGGLK    249

BSNT_01362___    251 TYWAQHLGEYSQSAKPLKELFPQGGFALHGNSKIFGIPGIALAFYVTAKK    300
                     .||..||.|::.|...||:|:|. ||.||||.|:||..|||||.|.:..|
BPUM_0660___m    250 PYWIAHLNEFATSTSDLKDLYPY-GFLLHGNIKMFGCLGIALAMYYSTPK    298

BSNT_01362___    301 EKKKLVAGLLIPVTLTAIVAGITEPIEFTFLFISPFLFAVHAVLAATMST    350
                     |.:|.|..|::|.||||:.||||||:||||||::|:||.:||:|.|||.|
BPUM_0660___m    299 ENRKKVLALVLPATLTAVFAGITEPLEFTFLFLAPYLFVIHALLGATMVT    348

BSNT_01362___    351 VMYMAGVVGNMGGGLIEAVTLNWIPLFGSHGMTYVYQILIGLSFTAIYFF    400
                     :|.|.||||.||.||||...||||||..:||.||:.|.:|||.|||:||.
BPUM_0660___m    349 IMNMFGVVGMMGSGLIEIAALNWIPLASNHGGTYLIQAIIGLLFTALYFV    398

BSNT_01362___    401 VFRFLILKFNIATPGREKDEQQETKLYSKKEYRERKNKD----ETASAAE    446
                     :||::|:||:|..|||:.:|  ||:||:|::|.....||    |....|.
BPUM_0660___m    399 IFRWVIVKFDIPLPGRKHEE--ETRLYTKQDYENANKKDHGKKEAPVYAS    446

BSNT_01362___    447 TADDTAFLYIEALGGKDNITEVTNCATRLRVSVKDETKVEPDNVF-RALG    495
                     ..::.|..::..||||:||.:|||||||||::|.|.:.|:....| :...
BPUM_0660___m    447 EYEEKAVYFLGGLGGKENIKDVTNCATRLRITVIDPSLVKDREYFTKHKM    496

BSNT_01362___    496 AHGVVRNGKAFQVIIGLSVPQMRERVEKLLNE    527
                     |||:.::|::.|:|:||||||:||..|..|  
BPUM_0660___m    497 AHGMAKSGQSIQIIVGLSVPQVRESFEAKL--    526


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.